Protein–RNA interactions for Protein: Q8N535

LINC00471, Putative uncharacterized protein encoded by LINC00471, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00471Q8N535 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC23.18■■□□□ 1.3
LINC00471Q8N535 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
LINC00471Q8N535 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
LINC00471Q8N535 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LINC00471Q8N535 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LINC00471Q8N535 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.17■■□□□ 1.3
LINC00471Q8N535 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
LINC00471Q8N535 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC23.17■■□□□ 1.3
LINC00471Q8N535 AC136428.2-201ENST00000563187 214 ntBASIC23.17■■□□□ 1.3
LINC00471Q8N535 AC097358.2-201ENST00000607541 1159 ntBASIC23.17■■□□□ 1.3
LINC00471Q8N535 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC23.16■■□□□ 1.3
LINC00471Q8N535 AC018358.1-201ENST00000631079 1402 ntBASIC23.16■■□□□ 1.3
LINC00471Q8N535 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
LINC00471Q8N535 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.15■■□□□ 1.3
LINC00471Q8N535 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.14■■□□□ 1.29
LINC00471Q8N535 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
LINC00471Q8N535 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.13■■□□□ 1.29
LINC00471Q8N535 MIR762-201ENST00000390236 83 ntBASIC23.13■■□□□ 1.29
LINC00471Q8N535 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
LINC00471Q8N535 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC23.12■■□□□ 1.29
LINC00471Q8N535 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.12■■□□□ 1.29
LINC00471Q8N535 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.12■■□□□ 1.29
LINC00471Q8N535 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
LINC00471Q8N535 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
LINC00471Q8N535 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
LINC00471Q8N535 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
LINC00471Q8N535 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
LINC00471Q8N535 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.1■■□□□ 1.29
LINC00471Q8N535 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.1■■□□□ 1.29
LINC00471Q8N535 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.1■■□□□ 1.29
LINC00471Q8N535 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LINC00471Q8N535 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
LINC00471Q8N535 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
LINC00471Q8N535 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
LINC00471Q8N535 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
LINC00471Q8N535 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
LINC00471Q8N535 AC135983.2-203ENST00000454486 1613 ntBASIC23.08■■□□□ 1.29
LINC00471Q8N535 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
LINC00471Q8N535 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.08■■□□□ 1.29
LINC00471Q8N535 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.08■■□□□ 1.28
LINC00471Q8N535 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
LINC00471Q8N535 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.07■■□□□ 1.28
LINC00471Q8N535 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LINC00471Q8N535 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
LINC00471Q8N535 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
LINC00471Q8N535 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.06■■□□□ 1.28
LINC00471Q8N535 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.05■■□□□ 1.28
LINC00471Q8N535 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
LINC00471Q8N535 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
LINC00471Q8N535 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
LINC00471Q8N535 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LINC00471Q8N535 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
LINC00471Q8N535 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
LINC00471Q8N535 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
LINC00471Q8N535 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
LINC00471Q8N535 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
LINC00471Q8N535 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
LINC00471Q8N535 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
LINC00471Q8N535 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
LINC00471Q8N535 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LINC00471Q8N535 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
LINC00471Q8N535 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC23.03■■□□□ 1.28
LINC00471Q8N535 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.03■■□□□ 1.28
LINC00471Q8N535 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
LINC00471Q8N535 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.02■■□□□ 1.28
LINC00471Q8N535 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LINC00471Q8N535 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
LINC00471Q8N535 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.02■■□□□ 1.28
LINC00471Q8N535 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
LINC00471Q8N535 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC23.02■■□□□ 1.28
LINC00471Q8N535 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
LINC00471Q8N535 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.01■■□□□ 1.27
LINC00471Q8N535 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LINC00471Q8N535 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
LINC00471Q8N535 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.01■■□□□ 1.27
LINC00471Q8N535 AC108673.1-201ENST00000510422 1159 ntBASIC23.01■■□□□ 1.27
LINC00471Q8N535 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
LINC00471Q8N535 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
LINC00471Q8N535 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23■■□□□ 1.27
LINC00471Q8N535 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23■■□□□ 1.27
LINC00471Q8N535 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
LINC00471Q8N535 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
LINC00471Q8N535 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23■■□□□ 1.27
LINC00471Q8N535 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
LINC00471Q8N535 AC005559.1-201ENST00000589661 871 ntBASIC22.99■■□□□ 1.27
LINC00471Q8N535 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LINC00471Q8N535 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LINC00471Q8N535 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.99■■□□□ 1.27
LINC00471Q8N535 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.98■■□□□ 1.27
LINC00471Q8N535 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LINC00471Q8N535 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
LINC00471Q8N535 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC22.98■■□□□ 1.27
LINC00471Q8N535 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LINC00471Q8N535 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
LINC00471Q8N535 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LINC00471Q8N535 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
LINC00471Q8N535 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LINC00471Q8N535 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.97■■□□□ 1.27
LINC00471Q8N535 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
LINC00471Q8N535 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms