Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.94■■□□□ 1.42
CCDC116Q8IYX3 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC116Q8IYX3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC116Q8IYX3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.94■■□□□ 1.42
CCDC116Q8IYX3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC116Q8IYX3 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
CCDC116Q8IYX3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.93■■□□□ 1.42
CCDC116Q8IYX3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.93■■□□□ 1.42
CCDC116Q8IYX3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC116Q8IYX3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC116Q8IYX3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
CCDC116Q8IYX3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
CCDC116Q8IYX3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC116Q8IYX3 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC116Q8IYX3 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC116Q8IYX3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC116Q8IYX3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CCDC116Q8IYX3 AP002414.2-202ENST00000590929 1450 ntBASIC23.91■■□□□ 1.42
CCDC116Q8IYX3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC116Q8IYX3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CCDC116Q8IYX3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.42
CCDC116Q8IYX3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
CCDC116Q8IYX3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.89■■□□□ 1.41
CCDC116Q8IYX3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC116Q8IYX3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC116Q8IYX3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC116Q8IYX3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.88■■□□□ 1.41
CCDC116Q8IYX3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC23.88■■□□□ 1.41
CCDC116Q8IYX3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC116Q8IYX3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC116Q8IYX3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CCDC116Q8IYX3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
CCDC116Q8IYX3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC116Q8IYX3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.87■■□□□ 1.41
CCDC116Q8IYX3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC116Q8IYX3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC116Q8IYX3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC116Q8IYX3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC116Q8IYX3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.86■■□□□ 1.41
CCDC116Q8IYX3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC116Q8IYX3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.85■■□□□ 1.41
CCDC116Q8IYX3 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC116Q8IYX3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC116Q8IYX3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.84■■□□□ 1.41
CCDC116Q8IYX3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.84■■□□□ 1.41
CCDC116Q8IYX3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.83■■□□□ 1.41
CCDC116Q8IYX3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC116Q8IYX3 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CCDC116Q8IYX3 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.83■■□□□ 1.4
CCDC116Q8IYX3 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CCDC116Q8IYX3 BX255925.1-201ENST00000566954 1854 ntBASIC23.82■■□□□ 1.4
CCDC116Q8IYX3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC116Q8IYX3 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC116Q8IYX3 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC116Q8IYX3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
CCDC116Q8IYX3 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CCDC116Q8IYX3 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.8■■□□□ 1.4
CCDC116Q8IYX3 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC116Q8IYX3 LINC01003-201ENST00000564834 1764 ntBASIC23.8■■□□□ 1.4
CCDC116Q8IYX3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CCDC116Q8IYX3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC116Q8IYX3 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC116Q8IYX3 AC110285.7-201ENST00000624417 1536 ntBASIC23.79■■□□□ 1.4
CCDC116Q8IYX3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CCDC116Q8IYX3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CCDC116Q8IYX3 ZNRF2P2-203ENST00000454624 420 ntBASIC23.78■■□□□ 1.4
CCDC116Q8IYX3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC116Q8IYX3 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC116Q8IYX3 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC116Q8IYX3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CCDC116Q8IYX3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CCDC116Q8IYX3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.77■■□□□ 1.4
CCDC116Q8IYX3 LINC01971-201ENST00000617888 1048 ntBASIC23.77■■□□□ 1.4
CCDC116Q8IYX3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC116Q8IYX3 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC116Q8IYX3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.76■■□□□ 1.39
CCDC116Q8IYX3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.76■■□□□ 1.39
CCDC116Q8IYX3 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
CCDC116Q8IYX3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC116Q8IYX3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC116Q8IYX3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC116Q8IYX3 ABHD17AP4-201ENST00000411545 909 ntBASIC23.75■■□□□ 1.39
CCDC116Q8IYX3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.75■■□□□ 1.39
CCDC116Q8IYX3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.75■■□□□ 1.39
CCDC116Q8IYX3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC116Q8IYX3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC23.74■■□□□ 1.39
CCDC116Q8IYX3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
CCDC116Q8IYX3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC116Q8IYX3 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC116Q8IYX3 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.73■■□□□ 1.39
CCDC116Q8IYX3 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.72■■□□□ 1.39
CCDC116Q8IYX3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC23.72■■□□□ 1.39
CCDC116Q8IYX3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.71■■□□□ 1.39
CCDC116Q8IYX3 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCDC116Q8IYX3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
CCDC116Q8IYX3 AC018358.1-201ENST00000631079 1402 ntBASIC23.71■■□□□ 1.39
CCDC116Q8IYX3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.71■■□□□ 1.39
CCDC116Q8IYX3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCDC116Q8IYX3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.7■■□□□ 1.38
CCDC116Q8IYX3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms