Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC28.33■■■□□ 2.13
DHX40Q8IX18 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC28.33■■■□□ 2.12
DHX40Q8IX18 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
DHX40Q8IX18 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.32■■■□□ 2.12
DHX40Q8IX18 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC28.31■■■□□ 2.12
DHX40Q8IX18 CAHM-201ENST00000604200 896 ntBASIC28.31■■■□□ 2.12
DHX40Q8IX18 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
DHX40Q8IX18 AL449106.1-201ENST00000608517 1980 ntBASIC28.31■■■□□ 2.12
DHX40Q8IX18 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
DHX40Q8IX18 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
DHX40Q8IX18 AP002414.2-202ENST00000590929 1450 ntBASIC28.3■■■□□ 2.12
DHX40Q8IX18 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
DHX40Q8IX18 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
DHX40Q8IX18 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
DHX40Q8IX18 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.27■■■□□ 2.12
DHX40Q8IX18 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
DHX40Q8IX18 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
DHX40Q8IX18 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
DHX40Q8IX18 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
DHX40Q8IX18 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
DHX40Q8IX18 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
DHX40Q8IX18 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
DHX40Q8IX18 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
DHX40Q8IX18 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
DHX40Q8IX18 SUZ12P1-203ENST00000578195 985 ntBASIC28.23■■■□□ 2.11
DHX40Q8IX18 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC28.23■■■□□ 2.11
DHX40Q8IX18 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
DHX40Q8IX18 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
DHX40Q8IX18 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
DHX40Q8IX18 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC28.22■■■□□ 2.11
DHX40Q8IX18 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.22■■■□□ 2.11
DHX40Q8IX18 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
DHX40Q8IX18 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
DHX40Q8IX18 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
DHX40Q8IX18 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
DHX40Q8IX18 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
DHX40Q8IX18 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
DHX40Q8IX18 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC28.2■■■□□ 2.1
DHX40Q8IX18 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
DHX40Q8IX18 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
DHX40Q8IX18 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
DHX40Q8IX18 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
DHX40Q8IX18 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
DHX40Q8IX18 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.19■■■□□ 2.1
DHX40Q8IX18 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC28.19■■■□□ 2.1
DHX40Q8IX18 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC28.18■■■□□ 2.1
DHX40Q8IX18 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC28.18■■■□□ 2.1
DHX40Q8IX18 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.18■■■□□ 2.1
DHX40Q8IX18 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC28.18■■■□□ 2.1
DHX40Q8IX18 AC091060.1-201ENST00000623524 1766 ntBASIC28.17■■■□□ 2.1
DHX40Q8IX18 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.17■■■□□ 2.1
DHX40Q8IX18 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC28.16■■■□□ 2.1
DHX40Q8IX18 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
DHX40Q8IX18 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
DHX40Q8IX18 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
DHX40Q8IX18 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.16■■■□□ 2.1
DHX40Q8IX18 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC28.15■■■□□ 2.1
DHX40Q8IX18 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
DHX40Q8IX18 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
DHX40Q8IX18 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
DHX40Q8IX18 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
DHX40Q8IX18 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC28.13■■■□□ 2.09
DHX40Q8IX18 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
DHX40Q8IX18 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC28.13■■■□□ 2.09
DHX40Q8IX18 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
DHX40Q8IX18 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
DHX40Q8IX18 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC28.13■■■□□ 2.09
DHX40Q8IX18 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
DHX40Q8IX18 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
DHX40Q8IX18 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
DHX40Q8IX18 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC28.11■■■□□ 2.09
DHX40Q8IX18 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
DHX40Q8IX18 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
DHX40Q8IX18 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
DHX40Q8IX18 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC28.11■■■□□ 2.09
DHX40Q8IX18 AC018358.1-201ENST00000631079 1402 ntBASIC28.1■■■□□ 2.09
DHX40Q8IX18 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
DHX40Q8IX18 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
DHX40Q8IX18 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC28.1■■■□□ 2.09
DHX40Q8IX18 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
DHX40Q8IX18 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
DHX40Q8IX18 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC28.09■■■□□ 2.09
DHX40Q8IX18 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
DHX40Q8IX18 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
DHX40Q8IX18 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
DHX40Q8IX18 MEST-211ENST00000437945 1455 ntTSL 5 BASIC28.08■■■□□ 2.09
DHX40Q8IX18 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
DHX40Q8IX18 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
DHX40Q8IX18 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
DHX40Q8IX18 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC28.07■■■□□ 2.08
DHX40Q8IX18 AC135983.2-203ENST00000454486 1613 ntBASIC28.07■■■□□ 2.08
DHX40Q8IX18 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
DHX40Q8IX18 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC28.06■■■□□ 2.08
DHX40Q8IX18 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
DHX40Q8IX18 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.05■■■□□ 2.08
DHX40Q8IX18 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
DHX40Q8IX18 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC28.05■■■□□ 2.08
DHX40Q8IX18 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
DHX40Q8IX18 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC28.03■■■□□ 2.08
DHX40Q8IX18 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms