Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.98■■■□□ 2.71
PDE6BP35913 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
PDE6BP35913 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC31.97■■■□□ 2.71
PDE6BP35913 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.97■■■□□ 2.71
PDE6BP35913 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
PDE6BP35913 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
PDE6BP35913 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
PDE6BP35913 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
PDE6BP35913 GUK1-208ENST00000366728 842 ntTSL 2 BASIC31.96■■■□□ 2.71
PDE6BP35913 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
PDE6BP35913 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.96■■■□□ 2.71
PDE6BP35913 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC31.96■■■□□ 2.71
PDE6BP35913 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC31.95■■■□□ 2.71
PDE6BP35913 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC31.95■■■□□ 2.71
PDE6BP35913 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
PDE6BP35913 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC31.94■■■□□ 2.7
PDE6BP35913 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
PDE6BP35913 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
PDE6BP35913 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
PDE6BP35913 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
PDE6BP35913 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
PDE6BP35913 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
PDE6BP35913 RARRES2P1-201ENST00000474487 481 ntBASIC31.92■■■□□ 2.7
PDE6BP35913 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
PDE6BP35913 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
PDE6BP35913 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
PDE6BP35913 AC126177.7-201ENST00000547904 679 ntBASIC31.91■■■□□ 2.7
PDE6BP35913 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC31.91■■■□□ 2.7
PDE6BP35913 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
PDE6BP35913 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
PDE6BP35913 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
PDE6BP35913 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
PDE6BP35913 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
PDE6BP35913 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.87■■■□□ 2.69
PDE6BP35913 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC31.87■■■□□ 2.69
PDE6BP35913 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC31.85■■■□□ 2.69
PDE6BP35913 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
PDE6BP35913 AL135925.1-201ENST00000605920 1701 ntBASIC31.85■■■□□ 2.69
PDE6BP35913 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
PDE6BP35913 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
PDE6BP35913 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
PDE6BP35913 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC31.84■■■□□ 2.69
PDE6BP35913 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC31.84■■■□□ 2.69
PDE6BP35913 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC31.84■■■□□ 2.69
PDE6BP35913 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PDE6BP35913 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
PDE6BP35913 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
PDE6BP35913 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
PDE6BP35913 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.82■■■□□ 2.68
PDE6BP35913 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
PDE6BP35913 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC31.82■■■□□ 2.68
PDE6BP35913 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
PDE6BP35913 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PDE6BP35913 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
PDE6BP35913 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC31.8■■■□□ 2.68
PDE6BP35913 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC31.8■■■□□ 2.68
PDE6BP35913 MED25-210ENST00000612854 801 ntTSL 5 BASIC31.8■■■□□ 2.68
PDE6BP35913 MOB2-207ENST00000614710 705 ntTSL 5 BASIC31.8■■■□□ 2.68
PDE6BP35913 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
PDE6BP35913 MED25-214ENST00000622402 642 ntTSL 5 BASIC31.8■■■□□ 2.68
PDE6BP35913 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
PDE6BP35913 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
PDE6BP35913 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PDE6BP35913 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PDE6BP35913 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
PDE6BP35913 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC31.77■■■□□ 2.68
PDE6BP35913 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.77■■■□□ 2.68
PDE6BP35913 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
PDE6BP35913 AL157400.5-201ENST00000507624 621 ntBASIC31.76■■■□□ 2.67
PDE6BP35913 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.74■■■□□ 2.67
PDE6BP35913 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC31.74■■■□□ 2.67
PDE6BP35913 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC31.74■■■□□ 2.67
PDE6BP35913 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
PDE6BP35913 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC31.74■■■□□ 2.67
PDE6BP35913 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC31.74■■■□□ 2.67
PDE6BP35913 AC129492.7-201ENST00000622992 756 ntBASIC31.74■■■□□ 2.67
PDE6BP35913 AC007029.1-201ENST00000604183 313 ntBASIC31.73■■■□□ 2.67
PDE6BP35913 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC31.73■■■□□ 2.67
PDE6BP35913 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
PDE6BP35913 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PDE6BP35913 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
PDE6BP35913 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
PDE6BP35913 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
PDE6BP35913 HES4-204ENST00000484667 667 ntTSL 3 BASIC31.7■■■□□ 2.67
PDE6BP35913 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC31.7■■■□□ 2.67
PDE6BP35913 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.66
PDE6BP35913 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
PDE6BP35913 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
PDE6BP35913 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC31.69■■■□□ 2.66
PDE6BP35913 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC31.69■■■□□ 2.66
PDE6BP35913 REST-210ENST00000638187 1334 ntTSL 5 BASIC31.69■■■□□ 2.66
PDE6BP35913 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
PDE6BP35913 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC31.68■■■□□ 2.66
PDE6BP35913 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
PDE6BP35913 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
PDE6BP35913 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.68■■■□□ 2.66
PDE6BP35913 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
PDE6BP35913 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
PDE6BP35913 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC31.66■■■□□ 2.66
PDE6BP35913 AL592293.1-201ENST00000502889 1188 ntBASIC31.66■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms