Protein–RNA interactions for Protein: P32247

BRS3, Bombesin receptor subtype-3, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRS3P32247 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRS3P32247 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BRS3P32247 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.63■□□□□ 0.89
BRS3P32247 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
BRS3P32247 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
BRS3P32247 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
BRS3P32247 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
BRS3P32247 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
BRS3P32247 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
BRS3P32247 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.61■□□□□ 0.89
BRS3P32247 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRS3P32247 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
BRS3P32247 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.6■□□□□ 0.89
BRS3P32247 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.6■□□□□ 0.89
BRS3P32247 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
BRS3P32247 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
BRS3P32247 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
BRS3P32247 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
BRS3P32247 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.58■□□□□ 0.89
BRS3P32247 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.58■□□□□ 0.89
BRS3P32247 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
BRS3P32247 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
BRS3P32247 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
BRS3P32247 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRS3P32247 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
BRS3P32247 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.57■□□□□ 0.88
BRS3P32247 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
BRS3P32247 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRS3P32247 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRS3P32247 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRS3P32247 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.57■□□□□ 0.88
BRS3P32247 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
BRS3P32247 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
BRS3P32247 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.56■□□□□ 0.88
BRS3P32247 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.56■□□□□ 0.88
BRS3P32247 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.56■□□□□ 0.88
BRS3P32247 MIR3648-2-201ENST00000581792 180 ntBASIC20.56■□□□□ 0.88
BRS3P32247 MIR3648-1-201ENST00000615959 180 ntBASIC20.56■□□□□ 0.88
BRS3P32247 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.55■□□□□ 0.88
BRS3P32247 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRS3P32247 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BRS3P32247 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.54■□□□□ 0.88
BRS3P32247 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRS3P32247 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRS3P32247 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRS3P32247 HLA-V-202ENST00000446817 847 ntBASIC20.53■□□□□ 0.88
BRS3P32247 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.53■□□□□ 0.88
BRS3P32247 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.53■□□□□ 0.88
BRS3P32247 CR559946.2-201ENST00000623684 991 ntBASIC20.53■□□□□ 0.88
BRS3P32247 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.53■□□□□ 0.88
BRS3P32247 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
BRS3P32247 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.52■□□□□ 0.88
BRS3P32247 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BRS3P32247 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.52■□□□□ 0.88
BRS3P32247 AC016575.1-201ENST00000607026 382 ntBASIC20.52■□□□□ 0.88
BRS3P32247 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.52■□□□□ 0.88
BRS3P32247 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
BRS3P32247 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.52■□□□□ 0.87
BRS3P32247 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
BRS3P32247 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.51■□□□□ 0.87
BRS3P32247 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRS3P32247 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.51■□□□□ 0.87
BRS3P32247 AC110285.7-201ENST00000624417 1536 ntBASIC20.51■□□□□ 0.87
BRS3P32247 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.5■□□□□ 0.87
BRS3P32247 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRS3P32247 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRS3P32247 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
BRS3P32247 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.5■□□□□ 0.87
BRS3P32247 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRS3P32247 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRS3P32247 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRS3P32247 AC100797.4-201ENST00000631653 1827 ntBASIC20.49■□□□□ 0.87
BRS3P32247 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
BRS3P32247 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
BRS3P32247 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRS3P32247 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
BRS3P32247 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRS3P32247 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRS3P32247 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
BRS3P32247 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
BRS3P32247 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
BRS3P32247 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRS3P32247 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRS3P32247 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.47■□□□□ 0.87
BRS3P32247 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRS3P32247 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
BRS3P32247 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
BRS3P32247 AC008813.1-201ENST00000536597 885 ntBASIC20.46■□□□□ 0.87
BRS3P32247 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.46■□□□□ 0.87
BRS3P32247 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.46■□□□□ 0.87
BRS3P32247 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
BRS3P32247 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
BRS3P32247 MIR639-201ENST00000384974 98 ntBASIC20.45■□□□□ 0.86
BRS3P32247 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
BRS3P32247 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
BRS3P32247 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
BRS3P32247 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
BRS3P32247 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
BRS3P32247 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
BRS3P32247 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms