Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
AP3D1O14617 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
AP3D1O14617 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
AP3D1O14617 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
AP3D1O14617 AC100797.4-201ENST00000631653 1827 ntBASIC23.5■■□□□ 1.35
AP3D1O14617 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
AP3D1O14617 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
AP3D1O14617 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
AP3D1O14617 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
AP3D1O14617 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
AP3D1O14617 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
AP3D1O14617 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
AP3D1O14617 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.49■■□□□ 1.35
AP3D1O14617 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
AP3D1O14617 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.48■■□□□ 1.35
AP3D1O14617 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
AP3D1O14617 AC044849.2-201ENST00000606596 710 ntBASIC23.48■■□□□ 1.35
AP3D1O14617 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
AP3D1O14617 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
AP3D1O14617 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
AP3D1O14617 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
AP3D1O14617 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
AP3D1O14617 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.47■■□□□ 1.35
AP3D1O14617 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
AP3D1O14617 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
AP3D1O14617 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.46■■□□□ 1.35
AP3D1O14617 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
AP3D1O14617 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
AP3D1O14617 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
AP3D1O14617 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
AP3D1O14617 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
AP3D1O14617 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.45■■□□□ 1.35
AP3D1O14617 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
AP3D1O14617 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.45■■□□□ 1.34
AP3D1O14617 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
AP3D1O14617 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC23.45■■□□□ 1.34
AP3D1O14617 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
AP3D1O14617 RPS2P35-201ENST00000443417 897 ntBASIC23.44■■□□□ 1.34
AP3D1O14617 AL121749.1-202ENST00000609313 2153 ntBASIC23.44■■□□□ 1.34
AP3D1O14617 AC135983.2-203ENST00000454486 1613 ntBASIC23.44■■□□□ 1.34
AP3D1O14617 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.43■■□□□ 1.34
AP3D1O14617 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
AP3D1O14617 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
AP3D1O14617 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
AP3D1O14617 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.42■■□□□ 1.34
AP3D1O14617 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
AP3D1O14617 WHAMMP2-203ENST00000563942 1603 ntBASIC23.42■■□□□ 1.34
AP3D1O14617 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC23.42■■□□□ 1.34
AP3D1O14617 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.42■■□□□ 1.34
AP3D1O14617 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
AP3D1O14617 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.41■■□□□ 1.34
AP3D1O14617 LINC01003-201ENST00000564834 1764 ntBASIC23.41■■□□□ 1.34
AP3D1O14617 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
AP3D1O14617 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
AP3D1O14617 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
AP3D1O14617 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.4■■□□□ 1.34
AP3D1O14617 LINC00273-201ENST00000539813 1452 ntBASIC23.4■■□□□ 1.34
AP3D1O14617 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.4■■□□□ 1.34
AP3D1O14617 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.39■■□□□ 1.34
AP3D1O14617 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
AP3D1O14617 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.39■■□□□ 1.33
AP3D1O14617 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
AP3D1O14617 BOD1-206ENST00000480951 814 ntTSL 2 BASIC23.39■■□□□ 1.33
AP3D1O14617 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.39■■□□□ 1.33
AP3D1O14617 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
AP3D1O14617 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.39■■□□□ 1.33
AP3D1O14617 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
AP3D1O14617 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
AP3D1O14617 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.38■■□□□ 1.33
AP3D1O14617 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
AP3D1O14617 AP002414.2-202ENST00000590929 1450 ntBASIC23.37■■□□□ 1.33
AP3D1O14617 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
AP3D1O14617 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
AP3D1O14617 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.37■■□□□ 1.33
AP3D1O14617 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
AP3D1O14617 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.36■■□□□ 1.33
AP3D1O14617 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
AP3D1O14617 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
AP3D1O14617 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
AP3D1O14617 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
AP3D1O14617 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.36■■□□□ 1.33
AP3D1O14617 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
AP3D1O14617 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
AP3D1O14617 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
AP3D1O14617 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.34■■□□□ 1.33
AP3D1O14617 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
AP3D1O14617 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.33■■□□□ 1.33
AP3D1O14617 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
AP3D1O14617 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
AP3D1O14617 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
AP3D1O14617 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
AP3D1O14617 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
AP3D1O14617 AC021231.2-201ENST00000594613 730 ntBASIC23.32■■□□□ 1.32
AP3D1O14617 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.32■■□□□ 1.32
AP3D1O14617 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
AP3D1O14617 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
AP3D1O14617 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.31■■□□□ 1.32
AP3D1O14617 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.31■■□□□ 1.32
AP3D1O14617 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
AP3D1O14617 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 161.7 ms