Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SIRPB1O00241 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SIRPB1O00241 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
SIRPB1O00241 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SIRPB1O00241 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SIRPB1O00241 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC21.36■■□□□ 1.01
SIRPB1O00241 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SIRPB1O00241 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SIRPB1O00241 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.36■■□□□ 1.01
SIRPB1O00241 BX255925.1-201ENST00000566954 1854 ntBASIC21.36■■□□□ 1.01
SIRPB1O00241 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SIRPB1O00241 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
SIRPB1O00241 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SIRPB1O00241 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SIRPB1O00241 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SIRPB1O00241 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.34■■□□□ 1.01
SIRPB1O00241 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SIRPB1O00241 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SIRPB1O00241 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.34■■□□□ 1.01
SIRPB1O00241 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SIRPB1O00241 AP002414.2-202ENST00000590929 1450 ntBASIC21.33■■□□□ 1.01
SIRPB1O00241 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
SIRPB1O00241 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SIRPB1O00241 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.33■■□□□ 1.01
SIRPB1O00241 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.33■■□□□ 1
SIRPB1O00241 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.32■■□□□ 1
SIRPB1O00241 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
SIRPB1O00241 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SIRPB1O00241 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SIRPB1O00241 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
SIRPB1O00241 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SIRPB1O00241 RPS2P35-201ENST00000443417 897 ntBASIC21.32■■□□□ 1
SIRPB1O00241 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SIRPB1O00241 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
SIRPB1O00241 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SIRPB1O00241 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SIRPB1O00241 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.31■■□□□ 1
SIRPB1O00241 LINC01003-201ENST00000564834 1764 ntBASIC21.31■■□□□ 1
SIRPB1O00241 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SIRPB1O00241 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SIRPB1O00241 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SIRPB1O00241 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SIRPB1O00241 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.29■■□□□ 1
SIRPB1O00241 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.29■■□□□ 1
SIRPB1O00241 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.29■■□□□ 1
SIRPB1O00241 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SIRPB1O00241 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SIRPB1O00241 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SIRPB1O00241 DUX4L29-201ENST00000425409 679 ntBASIC21.28■■□□□ 1
SIRPB1O00241 AC021231.2-201ENST00000594613 730 ntBASIC21.28■■□□□ 1
SIRPB1O00241 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.27■■□□□ 1
SIRPB1O00241 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.27■■□□□ 1
SIRPB1O00241 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SIRPB1O00241 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SIRPB1O00241 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIRPB1O00241 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SIRPB1O00241 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.25■□□□□ 0.99
SIRPB1O00241 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SIRPB1O00241 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
SIRPB1O00241 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SIRPB1O00241 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.25■□□□□ 0.99
SIRPB1O00241 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.24■□□□□ 0.99
SIRPB1O00241 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIRPB1O00241 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIRPB1O00241 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SIRPB1O00241 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIRPB1O00241 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIRPB1O00241 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
SIRPB1O00241 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIRPB1O00241 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SIRPB1O00241 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIRPB1O00241 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.23■□□□□ 0.99
SIRPB1O00241 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SIRPB1O00241 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SIRPB1O00241 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SIRPB1O00241 AL121749.1-202ENST00000609313 2153 ntBASIC21.23■□□□□ 0.99
SIRPB1O00241 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
SIRPB1O00241 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SIRPB1O00241 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SIRPB1O00241 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
SIRPB1O00241 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SIRPB1O00241 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SIRPB1O00241 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SIRPB1O00241 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SIRPB1O00241 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SIRPB1O00241 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.2■□□□□ 0.98
SIRPB1O00241 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SIRPB1O00241 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SIRPB1O00241 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SIRPB1O00241 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SIRPB1O00241 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.18■□□□□ 0.98
SIRPB1O00241 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SIRPB1O00241 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.18■□□□□ 0.98
SIRPB1O00241 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.18■□□□□ 0.98
SIRPB1O00241 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.18■□□□□ 0.98
SIRPB1O00241 AC018358.1-201ENST00000631079 1402 ntBASIC21.18■□□□□ 0.98
SIRPB1O00241 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SIRPB1O00241 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SIRPB1O00241 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SIRPB1O00241 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms