Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV34A0A0B4J273 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
TRAV34A0A0B4J273 AP004833.2-201ENST00000532228 1454 ntBASIC19.43■□□□□ 0.7
TRAV34A0A0B4J273 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV34A0A0B4J273 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV34A0A0B4J273 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV34A0A0B4J273 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC19.43■□□□□ 0.7
TRAV34A0A0B4J273 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC19.43■□□□□ 0.7
TRAV34A0A0B4J273 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV34A0A0B4J273 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TRAV34A0A0B4J273 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV34A0A0B4J273 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV34A0A0B4J273 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
TRAV34A0A0B4J273 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRAV34A0A0B4J273 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV34A0A0B4J273 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV34A0A0B4J273 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TRAV34A0A0B4J273 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV34A0A0B4J273 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TRAV34A0A0B4J273 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAV34A0A0B4J273 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV34A0A0B4J273 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAV34A0A0B4J273 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV34A0A0B4J273 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TRAV34A0A0B4J273 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV34A0A0B4J273 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRAV34A0A0B4J273 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV34A0A0B4J273 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.39■□□□□ 0.69
TRAV34A0A0B4J273 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.39■□□□□ 0.69
TRAV34A0A0B4J273 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV34A0A0B4J273 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TRAV34A0A0B4J273 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV34A0A0B4J273 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
TRAV34A0A0B4J273 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV34A0A0B4J273 KLF16-203ENST00000592313 508 ntTSL 3 BASIC19.38■□□□□ 0.69
TRAV34A0A0B4J273 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV34A0A0B4J273 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV34A0A0B4J273 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV34A0A0B4J273 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAV34A0A0B4J273 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
TRAV34A0A0B4J273 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
TRAV34A0A0B4J273 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV34A0A0B4J273 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV34A0A0B4J273 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV34A0A0B4J273 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV34A0A0B4J273 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC19.36■□□□□ 0.69
TRAV34A0A0B4J273 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV34A0A0B4J273 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV34A0A0B4J273 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV34A0A0B4J273 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
TRAV34A0A0B4J273 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TRAV34A0A0B4J273 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRAV34A0A0B4J273 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV34A0A0B4J273 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV34A0A0B4J273 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV34A0A0B4J273 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV34A0A0B4J273 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV34A0A0B4J273 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.33■□□□□ 0.69
TRAV34A0A0B4J273 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.33■□□□□ 0.69
TRAV34A0A0B4J273 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
TRAV34A0A0B4J273 AC127502.1-201ENST00000399971 1502 ntBASIC19.33■□□□□ 0.68
TRAV34A0A0B4J273 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.33■□□□□ 0.68
TRAV34A0A0B4J273 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV34A0A0B4J273 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV34A0A0B4J273 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC19.32■□□□□ 0.68
TRAV34A0A0B4J273 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.32■□□□□ 0.68
TRAV34A0A0B4J273 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.32■□□□□ 0.68
TRAV34A0A0B4J273 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.31■□□□□ 0.68
TRAV34A0A0B4J273 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV34A0A0B4J273 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC19.31■□□□□ 0.68
TRAV34A0A0B4J273 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRAV34A0A0B4J273 AC100797.4-201ENST00000631653 1827 ntBASIC19.3■□□□□ 0.68
TRAV34A0A0B4J273 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
TRAV34A0A0B4J273 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV34A0A0B4J273 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV34A0A0B4J273 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV34A0A0B4J273 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV34A0A0B4J273 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV34A0A0B4J273 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.29■□□□□ 0.68
TRAV34A0A0B4J273 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TRAV34A0A0B4J273 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TRAV34A0A0B4J273 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TRAV34A0A0B4J273 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV34A0A0B4J273 AC091060.1-201ENST00000623524 1766 ntBASIC19.28■□□□□ 0.68
TRAV34A0A0B4J273 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.27■□□□□ 0.68
TRAV34A0A0B4J273 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.27■□□□□ 0.68
TRAV34A0A0B4J273 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
TRAV34A0A0B4J273 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV34A0A0B4J273 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.27■□□□□ 0.68
TRAV34A0A0B4J273 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV34A0A0B4J273 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV34A0A0B4J273 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV34A0A0B4J273 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV34A0A0B4J273 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV34A0A0B4J273 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV34A0A0B4J273 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV34A0A0B4J273 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV34A0A0B4J273 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV34A0A0B4J273 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV34A0A0B4J273 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms