Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
TRBV5-3A0A0A0MS03 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TRBV5-3A0A0A0MS03 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
TRBV5-3A0A0A0MS03 CHML-205ENST00000638160 705 ntTSL 3 BASIC23.95■■□□□ 1.42
TRBV5-3A0A0A0MS03 AC135983.2-203ENST00000454486 1613 ntBASIC23.95■■□□□ 1.42
TRBV5-3A0A0A0MS03 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.95■■□□□ 1.42
TRBV5-3A0A0A0MS03 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.94■■□□□ 1.42
TRBV5-3A0A0A0MS03 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TRBV5-3A0A0A0MS03 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRBV5-3A0A0A0MS03 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRBV5-3A0A0A0MS03 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRBV5-3A0A0A0MS03 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRBV5-3A0A0A0MS03 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRBV5-3A0A0A0MS03 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRBV5-3A0A0A0MS03 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
TRBV5-3A0A0A0MS03 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
TRBV5-3A0A0A0MS03 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TRBV5-3A0A0A0MS03 AC018358.1-201ENST00000631079 1402 ntBASIC23.92■■□□□ 1.42
TRBV5-3A0A0A0MS03 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
TRBV5-3A0A0A0MS03 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.91■■□□□ 1.42
TRBV5-3A0A0A0MS03 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.91■■□□□ 1.42
TRBV5-3A0A0A0MS03 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TRBV5-3A0A0A0MS03 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TRBV5-3A0A0A0MS03 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.9■■□□□ 1.42
TRBV5-3A0A0A0MS03 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TRBV5-3A0A0A0MS03 RPS2-209ENST00000529806 993 ntTSL 3 BASIC23.9■■□□□ 1.42
TRBV5-3A0A0A0MS03 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.9■■□□□ 1.42
TRBV5-3A0A0A0MS03 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRBV5-3A0A0A0MS03 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRBV5-3A0A0A0MS03 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
TRBV5-3A0A0A0MS03 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
TRBV5-3A0A0A0MS03 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
TRBV5-3A0A0A0MS03 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRBV5-3A0A0A0MS03 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TRBV5-3A0A0A0MS03 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.88■■□□□ 1.41
TRBV5-3A0A0A0MS03 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRBV5-3A0A0A0MS03 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
TRBV5-3A0A0A0MS03 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TRBV5-3A0A0A0MS03 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TRBV5-3A0A0A0MS03 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TRBV5-3A0A0A0MS03 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
TRBV5-3A0A0A0MS03 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC23.87■■□□□ 1.41
TRBV5-3A0A0A0MS03 WHAMMP2-203ENST00000563942 1603 ntBASIC23.87■■□□□ 1.41
TRBV5-3A0A0A0MS03 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
TRBV5-3A0A0A0MS03 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.86■■□□□ 1.41
TRBV5-3A0A0A0MS03 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRBV5-3A0A0A0MS03 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TRBV5-3A0A0A0MS03 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TRBV5-3A0A0A0MS03 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.85■■□□□ 1.41
TRBV5-3A0A0A0MS03 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TRBV5-3A0A0A0MS03 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.84■■□□□ 1.41
TRBV5-3A0A0A0MS03 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TRBV5-3A0A0A0MS03 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.84■■□□□ 1.41
TRBV5-3A0A0A0MS03 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRBV5-3A0A0A0MS03 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRBV5-3A0A0A0MS03 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRBV5-3A0A0A0MS03 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TRBV5-3A0A0A0MS03 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TRBV5-3A0A0A0MS03 SUZ12P1-203ENST00000578195 985 ntBASIC23.83■■□□□ 1.41
TRBV5-3A0A0A0MS03 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TRBV5-3A0A0A0MS03 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TRBV5-3A0A0A0MS03 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
TRBV5-3A0A0A0MS03 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
TRBV5-3A0A0A0MS03 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC23.82■■□□□ 1.4
TRBV5-3A0A0A0MS03 AC005559.1-201ENST00000589661 871 ntBASIC23.82■■□□□ 1.4
TRBV5-3A0A0A0MS03 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
TRBV5-3A0A0A0MS03 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TRBV5-3A0A0A0MS03 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
TRBV5-3A0A0A0MS03 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TRBV5-3A0A0A0MS03 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
TRBV5-3A0A0A0MS03 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
TRBV5-3A0A0A0MS03 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TRBV5-3A0A0A0MS03 HNRNPLP2-201ENST00000568980 1570 ntBASIC23.79■■□□□ 1.4
TRBV5-3A0A0A0MS03 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TRBV5-3A0A0A0MS03 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TRBV5-3A0A0A0MS03 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRBV5-3A0A0A0MS03 MIR6090-201ENST00000622481 60 ntBASIC23.78■■□□□ 1.4
TRBV5-3A0A0A0MS03 LINC00273-201ENST00000539813 1452 ntBASIC23.78■■□□□ 1.4
TRBV5-3A0A0A0MS03 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.78■■□□□ 1.4
TRBV5-3A0A0A0MS03 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRBV5-3A0A0A0MS03 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
TRBV5-3A0A0A0MS03 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRBV5-3A0A0A0MS03 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
TRBV5-3A0A0A0MS03 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
TRBV5-3A0A0A0MS03 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.77■■□□□ 1.4
TRBV5-3A0A0A0MS03 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23.77■■□□□ 1.4
TRBV5-3A0A0A0MS03 AC108673.1-201ENST00000510422 1159 ntBASIC23.77■■□□□ 1.4
TRBV5-3A0A0A0MS03 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRBV5-3A0A0A0MS03 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
TRBV5-3A0A0A0MS03 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRBV5-3A0A0A0MS03 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.76■■□□□ 1.39
TRBV5-3A0A0A0MS03 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRBV5-3A0A0A0MS03 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRBV5-3A0A0A0MS03 AL449106.1-201ENST00000608517 1980 ntBASIC23.76■■□□□ 1.39
TRBV5-3A0A0A0MS03 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.75■■□□□ 1.39
TRBV5-3A0A0A0MS03 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TRBV5-3A0A0A0MS03 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRBV5-3A0A0A0MS03 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRBV5-3A0A0A0MS03 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
TRBV5-3A0A0A0MS03 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms