Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.74■□□□□ 0.91
SAA2-SAA4A0A096LPE2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SAA2-SAA4A0A096LPE2 LINC01003-201ENST00000564834 1764 ntBASIC20.74■□□□□ 0.91
SAA2-SAA4A0A096LPE2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SAA2-SAA4A0A096LPE2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.74■□□□□ 0.91
SAA2-SAA4A0A096LPE2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SAA2-SAA4A0A096LPE2 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
SAA2-SAA4A0A096LPE2 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SAA2-SAA4A0A096LPE2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.73■□□□□ 0.91
SAA2-SAA4A0A096LPE2 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SAA2-SAA4A0A096LPE2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SAA2-SAA4A0A096LPE2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SAA2-SAA4A0A096LPE2 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.72■□□□□ 0.91
SAA2-SAA4A0A096LPE2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SAA2-SAA4A0A096LPE2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SAA2-SAA4A0A096LPE2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.71■□□□□ 0.91
SAA2-SAA4A0A096LPE2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.71■□□□□ 0.91
SAA2-SAA4A0A096LPE2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SAA2-SAA4A0A096LPE2 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SAA2-SAA4A0A096LPE2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SAA2-SAA4A0A096LPE2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SAA2-SAA4A0A096LPE2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SAA2-SAA4A0A096LPE2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SAA2-SAA4A0A096LPE2 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SAA2-SAA4A0A096LPE2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SAA2-SAA4A0A096LPE2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SAA2-SAA4A0A096LPE2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.69■□□□□ 0.9
SAA2-SAA4A0A096LPE2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.69■□□□□ 0.9
SAA2-SAA4A0A096LPE2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SAA2-SAA4A0A096LPE2 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SAA2-SAA4A0A096LPE2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SAA2-SAA4A0A096LPE2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SAA2-SAA4A0A096LPE2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.69■□□□□ 0.9
SAA2-SAA4A0A096LPE2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SAA2-SAA4A0A096LPE2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SAA2-SAA4A0A096LPE2 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SAA2-SAA4A0A096LPE2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SAA2-SAA4A0A096LPE2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SAA2-SAA4A0A096LPE2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SAA2-SAA4A0A096LPE2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.67■□□□□ 0.9
SAA2-SAA4A0A096LPE2 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SAA2-SAA4A0A096LPE2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.66■□□□□ 0.9
SAA2-SAA4A0A096LPE2 AL121749.1-202ENST00000609313 2153 ntBASIC20.65■□□□□ 0.9
SAA2-SAA4A0A096LPE2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SAA2-SAA4A0A096LPE2 RPS2P35-201ENST00000443417 897 ntBASIC20.65■□□□□ 0.9
SAA2-SAA4A0A096LPE2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SAA2-SAA4A0A096LPE2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SAA2-SAA4A0A096LPE2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.89
SAA2-SAA4A0A096LPE2 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.64■□□□□ 0.89
SAA2-SAA4A0A096LPE2 AC021231.2-201ENST00000594613 730 ntBASIC20.64■□□□□ 0.89
SAA2-SAA4A0A096LPE2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.64■□□□□ 0.89
SAA2-SAA4A0A096LPE2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SAA2-SAA4A0A096LPE2 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SAA2-SAA4A0A096LPE2 DUX4L29-201ENST00000425409 679 ntBASIC20.63■□□□□ 0.89
SAA2-SAA4A0A096LPE2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SAA2-SAA4A0A096LPE2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SAA2-SAA4A0A096LPE2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SAA2-SAA4A0A096LPE2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SAA2-SAA4A0A096LPE2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SAA2-SAA4A0A096LPE2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SAA2-SAA4A0A096LPE2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SAA2-SAA4A0A096LPE2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.62■□□□□ 0.89
SAA2-SAA4A0A096LPE2 AC018358.1-201ENST00000631079 1402 ntBASIC20.61■□□□□ 0.89
SAA2-SAA4A0A096LPE2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SAA2-SAA4A0A096LPE2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SAA2-SAA4A0A096LPE2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SAA2-SAA4A0A096LPE2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SAA2-SAA4A0A096LPE2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SAA2-SAA4A0A096LPE2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.6■□□□□ 0.89
SAA2-SAA4A0A096LPE2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SAA2-SAA4A0A096LPE2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
SAA2-SAA4A0A096LPE2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SAA2-SAA4A0A096LPE2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
SAA2-SAA4A0A096LPE2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.59■□□□□ 0.89
SAA2-SAA4A0A096LPE2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SAA2-SAA4A0A096LPE2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SAA2-SAA4A0A096LPE2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.59■□□□□ 0.89
SAA2-SAA4A0A096LPE2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SAA2-SAA4A0A096LPE2 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
SAA2-SAA4A0A096LPE2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
SAA2-SAA4A0A096LPE2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SAA2-SAA4A0A096LPE2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SAA2-SAA4A0A096LPE2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SAA2-SAA4A0A096LPE2 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
SAA2-SAA4A0A096LPE2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SAA2-SAA4A0A096LPE2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SAA2-SAA4A0A096LPE2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SAA2-SAA4A0A096LPE2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SAA2-SAA4A0A096LPE2 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SAA2-SAA4A0A096LPE2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.56■□□□□ 0.88
SAA2-SAA4A0A096LPE2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SAA2-SAA4A0A096LPE2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SAA2-SAA4A0A096LPE2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SAA2-SAA4A0A096LPE2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SAA2-SAA4A0A096LPE2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SAA2-SAA4A0A096LPE2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.55■□□□□ 0.88
SAA2-SAA4A0A096LPE2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SAA2-SAA4A0A096LPE2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SAA2-SAA4A0A096LPE2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SAA2-SAA4A0A096LPE2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms