Protein–RNA interactions for Protein: O60832

DKC1, H/ACA ribonucleoprotein complex subunit 4, humanhuman

Known RBP eCLIP

Length 514 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1O60832 NOP56-208ENST00000467857 735 ntTSL 210.1□□□□□ -0.791e-323■□□□□ 9.3
DKC1O60832 SNORD57-201ENST00000448188 72 ntBASIC-1.06□□□□□ -2.581e-323■□□□□ 9.3
DKC1O60832 ALB-204ENST00000441319 591 ntTSL 46.7□□□□□ -1.341e-58■□□□□ 9.2
DKC1O60832 ALB-217ENST00000514786 577 ntTSL 42.07□□□□□ -2.081e-58■□□□□ 9.2
DKC1O60832 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.06■□□□□ 0.84e-7■□□□□ 9.2
DKC1O60832 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.26■□□□□ 0.674e-7■□□□□ 9.2
DKC1O60832 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.24■□□□□ 0.674e-7■□□□□ 9.2
DKC1O60832 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.554e-10■□□□□ 9.2
DKC1O60832 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.014e-10■□□□□ 9.2
DKC1O60832 SNORD86-201ENST00000391196 86 ntBASIC9.44□□□□□ -0.92e-13■□□□□ 9.2
DKC1O60832 ARIH2-204ENST00000433170 560 ntTSL 422.55■■□□□ 1.25e-6■□□□□ 9.1
DKC1O60832 ARIH2-218ENST00000474936 695 ntTSL 222.55■■□□□ 1.25e-6■□□□□ 9.1
DKC1O60832 ARIH2-226ENST00000488963 517 ntTSL 322.55■■□□□ 1.25e-6■□□□□ 9.1
DKC1O60832 ARIH2-202ENST00000420814 884 ntTSL 320.69■□□□□ 0.95e-6■□□□□ 9.1
DKC1O60832 ARIH2-224ENST00000486316 406 ntTSL 420.69■□□□□ 0.95e-6■□□□□ 9.1
DKC1O60832 ARIH2-227ENST00000490095 1001 ntTSL 520.69■□□□□ 0.95e-6■□□□□ 9.1
DKC1O60832 ARIH2-230ENST00000495761 569 ntTSL 320.32■□□□□ 0.845e-6■□□□□ 9.1
DKC1O60832 ARIH2-219ENST00000478224 507 ntTSL 318.96■□□□□ 0.635e-6■□□□□ 9.1
DKC1O60832 ARIH2-206ENST00000449729 678 ntTSL 218.62■□□□□ 0.575e-6■□□□□ 9.1
DKC1O60832 ARIH2-217ENST00000474618 566 ntTSL 317.8■□□□□ 0.445e-6■□□□□ 9.1
DKC1O60832 ARIH2-221ENST00000482427 556 ntTSL 417.8■□□□□ 0.445e-6■□□□□ 9.1
DKC1O60832 ARIH2-222ENST00000483333 674 ntTSL 517.8■□□□□ 0.445e-6■□□□□ 9.1
DKC1O60832 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.445e-6■□□□□ 9.1
DKC1O60832 ARIH2-203ENST00000430423 753 ntTSL 217.7■□□□□ 0.425e-6■□□□□ 9.1
DKC1O60832 ARIH2-208ENST00000452882 598 ntTSL 317.7■□□□□ 0.425e-6■□□□□ 9.1
DKC1O60832 ARIH2-231ENST00000498314 649 ntTSL 417.7■□□□□ 0.425e-6■□□□□ 9.1
DKC1O60832 SPG7-204ENST00000561911 1025 ntTSL 517.61■□□□□ 0.415e-6■□□□□ 9.1
DKC1O60832 SPG7-218ENST00000568205 463 ntTSL 217.61■□□□□ 0.415e-6■□□□□ 9.1
DKC1O60832 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.295e-6■□□□□ 9.1
DKC1O60832 SPG7-213ENST00000566221 734 ntTSL 316.59■□□□□ 0.255e-6■□□□□ 9.1
DKC1O60832 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.215e-6■□□□□ 9.1
DKC1O60832 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.135e-6■□□□□ 9.1
DKC1O60832 IGF1R-210ENST00000559925 2280 ntTSL 1 (best)15.74■□□□□ 0.115e-6■□□□□ 9.1
DKC1O60832 ARIH2-223ENST00000484999 728 ntTSL 515.62■□□□□ 0.095e-6■□□□□ 9.1
DKC1O60832 SPG7-203ENST00000561702 2042 ntTSL 215.58■□□□□ 0.095e-6■□□□□ 9.1
DKC1O60832 ARIH2-213ENST00000466850 546 ntTSL 213.86□□□□□ -0.195e-6■□□□□ 9.1
DKC1O60832 SPG7-211ENST00000565370 686 ntTSL 313.85□□□□□ -0.195e-6■□□□□ 9.1
DKC1O60832 ARIH2-215ENST00000470296 457 ntTSL 1 (best)13.77□□□□□ -0.215e-6■□□□□ 9.1
DKC1O60832 SPG7-222ENST00000569820 2305 ntTSL 512.76□□□□□ -0.375e-6■□□□□ 9.1
DKC1O60832 DPY19L3-201ENST00000342179 6015 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.395e-6■□□□□ 9.1
DKC1O60832 ARIH2-210ENST00000463204 522 ntTSL 511.89□□□□□ -0.515e-6■□□□□ 9.1
DKC1O60832 PSMD14-202ENST00000437630 577 ntTSL 511.88□□□□□ -0.515e-6■□□□□ 9.1
DKC1O60832 ARIH2-201ENST00000356401 4933 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.585e-6■□□□□ 9.1
DKC1O60832 RFX3-207ENST00000449190 869 ntTSL 310.31□□□□□ -0.765e-6■□□□□ 9.1
DKC1O60832 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC9.45□□□□□ -0.95e-6■□□□□ 9.1
DKC1O60832 DPY19L3-209ENST00000592142 5968 ntTSL 1 (best)8.83□□□□□ -15e-6■□□□□ 9.1
DKC1O60832 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.045e-6■□□□□ 9.1
DKC1O60832 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.365e-6■□□□□ 9.1
DKC1O60832 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.385e-6■□□□□ 9.1
DKC1O60832 PPAN-203ENST00000430370 594 ntTSL 313.74□□□□□ -0.215e-71■□□□□ 9.1
DKC1O60832 SNORD105-201ENST00000386910 85 ntBASIC0.71□□□□□ -2.35e-71■□□□□ 9.1
DKC1O60832 TM9SF4-204ENST00000442842 563 ntTSL 415.18■□□□□ 0.023e-7■□□□□ 9
DKC1O60832 TM9SF4-201ENST00000217315 4032 ntTSL 2 BASIC13.43□□□□□ -0.263e-7■□□□□ 9
DKC1O60832 TM9SF4-203ENST00000417389 553 ntTSL 412.42□□□□□ -0.423e-7■□□□□ 9
DKC1O60832 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.33e-7■□□□□ 9
DKC1O60832 TM9SF4-205ENST00000450829 550 ntTSL 46.35□□□□□ -1.393e-7■□□□□ 9
DKC1O60832 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.933e-6■□□□□ 9
DKC1O60832 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.012e-8■□□□□ 8.9
DKC1O60832 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.932e-8■□□□□ 8.9
DKC1O60832 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.492e-8■□□□□ 8.9
DKC1O60832 ACTG1-205ENST00000572105 1168 ntTSL 515.69■□□□□ 0.12e-8■□□□□ 8.9
DKC1O60832 ACTG1-215ENST00000576917 1958 ntTSL 514.96□□□□□ -0.012e-8■□□□□ 8.9
DKC1O60832 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.062e-8■□□□□ 8.9
DKC1O60832 ACTG1-213ENST00000576214 1024 ntTSL 514.1□□□□□ -0.152e-8■□□□□ 8.9
DKC1O60832 ACTG1-216ENST00000615544 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.182e-8■□□□□ 8.9
DKC1O60832 ACTG1-214ENST00000576544 1720 ntTSL 513.83□□□□□ -0.22e-8■□□□□ 8.9
DKC1O60832 ACTG1-212ENST00000576209 1698 ntTSL 1 (best)13.54□□□□□ -0.242e-8■□□□□ 8.9
DKC1O60832 ACTG1-207ENST00000574671 1678 ntTSL 1 (best)13.48□□□□□ -0.252e-8■□□□□ 8.9
DKC1O60832 FN1-217ENST00000471193 496 ntTSL 313□□□□□ -0.332e-85■□□□□ 8.9
DKC1O60832 SNORD116-22-201ENST00000384430 92 ntBASIC-2.01□□□□□ -2.739e-25■□□□□ 8.9
DKC1O60832 A2M-211ENST00000543436 600 ntTSL 512.77□□□□□ -0.371e-32■□□□□ 8.9
DKC1O60832 LDB1-204ENST00000490751 762 ntTSL 235.18■■■■□ 3.221e-9■□□□□ 8.9
DKC1O60832 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC29.16■■■□□ 2.261e-9■□□□□ 8.9
DKC1O60832 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.511e-9■□□□□ 8.9
DKC1O60832 CFDP1-201ENST00000283882 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.171e-9■□□□□ 8.9
DKC1O60832 SNORD116-12-201ENST00000384468 92 ntBASIC4.06□□□□□ -1.764e-13■□□□□ 8.9
DKC1O60832 RPL17-C18orf32-202ENST00000577910 1012 ntTSL 58.22□□□□□ -1.097e-48■□□□□ 8.9
DKC1O60832 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.227e-48■□□□□ 8.9
DKC1O60832 RPL17-219ENST00000584364 523 ntTSL 24.72□□□□□ -1.657e-48■□□□□ 8.9
DKC1O60832 RPL17-214ENST00000582588 401 ntTSL 23.06□□□□□ -1.927e-48■□□□□ 8.9
DKC1O60832 SNORD58C-201ENST00000365223 64 ntBASIC-0.93□□□□□ -2.567e-48■□□□□ 8.9
DKC1O60832 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.161e-8■□□□□ 8.9
DKC1O60832 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC15.02□□□□□ -0.013e-13■□□□□ 8.8
DKC1O60832 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC14.43□□□□□ -0.13e-13■□□□□ 8.8
DKC1O60832 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.13e-13■□□□□ 8.8
DKC1O60832 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.113e-13■□□□□ 8.8
DKC1O60832 RNF43-203ENST00000577716 4367 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.53e-13■□□□□ 8.8
DKC1O60832 RNF43-207ENST00000583753 3560 ntTSL 2 BASIC11.04□□□□□ -0.643e-13■□□□□ 8.8
DKC1O60832 FN1-226ENST00000496542 695 ntTSL 214.5□□□□□ -0.091e-323■□□□□ 8.8
DKC1O60832 SNHG1-225ENST00000545920 625 ntTSL 26.89□□□□□ -1.311e-323■□□□□ 8.7
DKC1O60832 GSN-207ENST00000432226 1042 ntTSL 519.39■□□□□ 0.693e-26■□□□□ 8.7
DKC1O60832 GSN-213ENST00000483960 802 ntTSL 312.73□□□□□ -0.373e-26■□□□□ 8.7
DKC1O60832 GSN-214ENST00000485767 6454 ntTSL 1 (best)11.57□□□□□ -0.563e-26■□□□□ 8.7
DKC1O60832 FN1-221ENST00000480737 384 ntTSL 22.82□□□□□ -1.961e-46■□□□□ 8.7
DKC1O60832 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.068e-32■□□□□ 8.7
DKC1O60832 A2M-212ENST00000545828 471 ntTSL 45.4□□□□□ -1.548e-32■□□□□ 8.7
DKC1O60832 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.497e-7■□□□□ 8.6
DKC1O60832 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.987e-7■□□□□ 8.6
DKC1O60832 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC21.1■□□□□ 0.977e-7■□□□□ 8.6
DKC1O60832 PRKCA-203ENST00000578063 1733 ntTSL 1 (best)20.67■□□□□ 0.97e-7■□□□□ 8.6
Retrieved 100 of 8,567 protein–RNA pairs in 317.2 ms