RNA–Protein interactions for RNA: ENST00000576544.5

ACTG1-214, Transcript of actin gamma 1, humanhuman

TSL 5

Gene ACTG1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG1-214ENST00000576544 NISCHQ9Y2I1 1504 aa29.52■■■□□ 2.32
ACTG1-214ENST00000576544 CCDC180Q9P1Z9 1646 aa26.03■■□□□ 1.76
ACTG1-214ENST00000576544 ABCC9O60706 1549 aa25.36■■□□□ 1.65
ACTG1-214ENST00000576544 DCAF8L2P0C7V8 631 aa24.73■■□□□ 1.55
ACTG1-214ENST00000576544 ZCCHC6Q5VYS8 1495 aaKnown RBP24.63■■□□□ 1.53
ACTG1-214ENST00000576544 NACADO15069 1562 aa24.42■■□□□ 1.5
ACTG1-214ENST00000576544 RB1CC1Q8TDY2 1594 aa24.4■■□□□ 1.5
ACTG1-214ENST00000576544 DCAF1Q9Y4B6 1507 aa24.34■■□□□ 1.49
ACTG1-214ENST00000576544 MYO15BQ96JP2 1530 aa24.29■■□□□ 1.48
ACTG1-214ENST00000576544 UNC13AQ9UPW8 1703 aa23.96■■□□□ 1.43
ACTG1-214ENST00000576544 SCRIBQ14160 1630 aa23.93■■□□□ 1.42
ACTG1-214ENST00000576544 PABPN1Q86U42 306 aaKnown RBP eCLIP23.81■■□□□ 1.4
ACTG1-214ENST00000576544 BICRAQ9NZM4 1560 aa23.72■■□□□ 1.39
ACTG1-214ENST00000576544 SHROOM4Q9ULL8 1493 aa23.69■■□□□ 1.38
ACTG1-214ENST00000576544 DNAJC5BQ9UF47 199 aa23.08■■□□□ 1.29
ACTG1-214ENST00000576544 CECR2Q9BXF3 1484 aa23.06■■□□□ 1.28
ACTG1-214ENST00000576544 EIF4G1Q04637 1599 aaKnown RBP23.05■■□□□ 1.28
ACTG1-214ENST00000576544 CC2D2AQ9P2K1 1620 aa22.91■■□□□ 1.26
ACTG1-214ENST00000576544 SMARCA4P51532 1647 aa22.85■■□□□ 1.25
ACTG1-214ENST00000576544 BAZ1AQ9NRL2 1556 aaPredicted RBP22.83■■□□□ 1.24
ACTG1-214ENST00000576544 MROH2BQ7Z745 1585 aa22.81■■□□□ 1.24
ACTG1-214ENST00000576544 ATAD2BQ9ULI0 1458 aa22.65■■□□□ 1.22
ACTG1-214ENST00000576544 RSF1Q96T23 1441 aaPredicted RBP22.64■■□□□ 1.22
ACTG1-214ENST00000576544 WIZO95785 1651 aa22.62■■□□□ 1.21
ACTG1-214ENST00000576544 SMARCA2P51531 1590 aa22.58■■□□□ 1.21
ACTG1-214ENST00000576544 NCAPD3P42695 1498 aa22.55■■□□□ 1.2
ACTG1-214ENST00000576544 PEG3Q9GZU2 1588 aa22.55■■□□□ 1.2
ACTG1-214ENST00000576544 BAZ1BQ9UIG0 1483 aaKnown RBP22.48■■□□□ 1.19
ACTG1-214ENST00000576544 HMGXB3Q12766 1538 aa22.44■■□□□ 1.18
ACTG1-214ENST00000576544 SUPT5HO00267 1087 aaKnown RBP22.43■■□□□ 1.18
ACTG1-214ENST00000576544 TOP2AP11388 1531 aaKnown RBP22.29■■□□□ 1.16
ACTG1-214ENST00000576544 CCDC88BA6NC98 1476 aa22.09■■□□□ 1.13
ACTG1-214ENST00000576544 NESP48681 1621 aa22.06■■□□□ 1.12
ACTG1-214ENST00000576544 CADPSQ9ULU8 1353 aa21.95■■□□□ 1.1
ACTG1-214ENST00000576544 LAMC3Q9Y6N6 1575 aa21.9■■□□□ 1.1
ACTG1-214ENST00000576544 CFTRP13569 1480 aa21.86■■□□□ 1.09
ACTG1-214ENST00000576544 ERCC6Q03468 1493 aa21.78■■□□□ 1.08
ACTG1-214ENST00000576544 KIF21AQ7Z4S6 1674 aa21.77■■□□□ 1.08
ACTG1-214ENST00000576544 PDS5BQ9NTI5 1447 aa21.75■■□□□ 1.07
ACTG1-214ENST00000576544 PRDM2Q13029 1718 aa21.71■■□□□ 1.07
ACTG1-214ENST00000576544 FANCD2Q9BXW9 1451 aa21.71■■□□□ 1.07
ACTG1-214ENST00000576544 CEP164Q9UPV0 1460 aa21.63■■□□□ 1.05
ACTG1-214ENST00000576544 THOC2Q8NI27 1593 aaKnown RBP21.56■■□□□ 1.04
ACTG1-214ENST00000576544 MRC2Q9UBG0 1479 aa21.53■■□□□ 1.04
ACTG1-214ENST00000576544 URB2Q14146 1524 aaKnown RBP21.5■■□□□ 1.03
ACTG1-214ENST00000576544 WDR62O43379 1518 aa21.44■■□□□ 1.02
ACTG1-214ENST00000576544 ABCC8Q09428 1581 aa21.43■■□□□ 1.02
ACTG1-214ENST00000576544 TOPBP1Q92547 1522 aa21.39■■□□□ 1.02
ACTG1-214ENST00000576544 CUX1P39880 1505 aa21.37■■□□□ 1.01
ACTG1-214ENST00000576544 DNMBPQ6XZF7 1577 aa21.36■■□□□ 1.01
ACTG1-214ENST00000576544 CUX2O14529 1486 aa21.36■■□□□ 1.01
ACTG1-214ENST00000576544 WRNQ14191 1432 aaPredicted RBP eCLIP21.32■■□□□ 11e-8■□□□□ 10.4
ACTG1-214ENST00000576544 SYNJ1O43426 1573 aa21.3■■□□□ 1
ACTG1-214ENST00000576544 POLA1P09884 1462 aaPredicted RBP21.24■□□□□ 0.99
ACTG1-214ENST00000576544 FGD5Q6ZNL6 1462 aa21.24■□□□□ 0.99
ACTG1-214ENST00000576544 TOP2BQ02880 1626 aa21.23■□□□□ 0.99
ACTG1-214ENST00000576544 RAD54L2Q9Y4B4 1467 aa21.21■□□□□ 0.99
ACTG1-214ENST00000576544 BIVM-ERCC5R4GMW8 1640 aa21.21■□□□□ 0.99
ACTG1-214ENST00000576544 SOGA1O94964 1423 aa21.17■□□□□ 0.98
ACTG1-214ENST00000576544 IFT140Q96RY7 1462 aa21.14■□□□□ 0.97
ACTG1-214ENST00000576544 TARBP1Q13395 1621 aaKnown RBP21.14■□□□□ 0.97
ACTG1-214ENST00000576544 ZNF608Q9ULD9 1512 aaPredicted RBP21.13■□□□□ 0.97
ACTG1-214ENST00000576544 TRIM41Q8WV44 630 aa21.08■□□□□ 0.97
ACTG1-214ENST00000576544 TDRD9Q8NDG6 1382 aaKnown RBP21.08■□□□□ 0.96
ACTG1-214ENST00000576544 AQRO60306 1485 aaKnown RBP eCLIP21.05■□□□□ 0.964e-13■■■■■ 34.6
ACTG1-214ENST00000576544 CHIC1Q5VXU3 224 aa21.05■□□□□ 0.96
ACTG1-214ENST00000576544 WDR97A6NE52 1622 aa21.02■□□□□ 0.96
ACTG1-214ENST00000576544 ABCA10Q8WWZ4 1543 aa21■□□□□ 0.95
ACTG1-214ENST00000576544 EIF4G3O43432 1585 aaKnown RBP21■□□□□ 0.95
ACTG1-214ENST00000576544 GAPVD1Q14C86 1478 aa20.91■□□□□ 0.94
ACTG1-214ENST00000576544 ABCA5Q8WWZ7 1642 aa20.9■□□□□ 0.94
ACTG1-214ENST00000576544 RUSC2Q8N2Y8 1516 aa20.87■□□□□ 0.93
ACTG1-214ENST00000576544 PBRM1Q86U86 1689 aa20.86■□□□□ 0.93
ACTG1-214ENST00000576544 GRIN2BQ13224 1484 aa20.84■□□□□ 0.93
ACTG1-214ENST00000576544 KIF27Q86VH2 1401 aa20.83■□□□□ 0.92
ACTG1-214ENST00000576544 SNAPC4Q5SXM2 1469 aa20.82■□□□□ 0.92
ACTG1-214ENST00000576544 FBLN2P98095 1184 aa20.79■□□□□ 0.92
ACTG1-214ENST00000576544 FAM9AQ8IZU1 332 aaPredicted RBP20.76■□□□□ 0.91
ACTG1-214ENST00000576544 IGF1RP08069 1367 aa20.75■□□□□ 0.91
ACTG1-214ENST00000576544 ERICH3Q5RHP9 1530 aa20.74■□□□□ 0.91
ACTG1-214ENST00000576544 MAGI1Q96QZ7 1491 aaPredicted RBP20.73■□□□□ 0.91
ACTG1-214ENST00000576544 CHD1O14646 1710 aa20.72■□□□□ 0.91
ACTG1-214ENST00000576544 CHMP7Q8WUX9 453 aaPredicted RBP20.7■□□□□ 0.9
ACTG1-214ENST00000576544 ADAMTS12P58397 1594 aa20.68■□□□□ 0.9
ACTG1-214ENST00000576544 SYNJ2O15056 1496 aa20.67■□□□□ 0.9
ACTG1-214ENST00000576544 FHAD1B1AJZ9 1412 aa20.65■□□□□ 0.9
ACTG1-214ENST00000576544 CARMIL1Q5VZK9 1371 aa20.63■□□□□ 0.89
ACTG1-214ENST00000576544 OSCARQ8IYS5 282 aa20.62■□□□□ 0.89
ACTG1-214ENST00000576544 CSRNP3Q8WYN3 585 aa20.61■□□□□ 0.89
ACTG1-214ENST00000576544 CUL7Q14999 1698 aa20.6■□□□□ 0.89
ACTG1-214ENST00000576544 GRIN2AQ12879 1464 aa20.59■□□□□ 0.89
ACTG1-214ENST00000576544 EHMT2Q96KQ7 1210 aa20.56■□□□□ 0.88
ACTG1-214ENST00000576544 EEA1Q15075 1411 aa20.55■□□□□ 0.88
ACTG1-214ENST00000576544 RAPGEF2Q9Y4G8 1499 aa20.52■□□□□ 0.87
ACTG1-214ENST00000576544 CEP170Q5SW79 1584 aa20.51■□□□□ 0.87
ACTG1-214ENST00000576544 PRXQ9BXM0 1461 aa20.51■□□□□ 0.87
ACTG1-214ENST00000576544 NUP160Q12769 1436 aa20.46■□□□□ 0.87
ACTG1-214ENST00000576544 DNAJC5Q9H3Z4 198 aa20.45■□□□□ 0.86
ACTG1-214ENST00000576544 CLASP1Q7Z460 1538 aa20.43■□□□□ 0.86
ACTG1-214ENST00000576544 KIF21BO75037 1637 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms