RNA–Protein interactions for RNA: ENST00000569820.5

SPG7-222, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 2,305 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-222ENST00000569820 NISCHQ9Y2I1 1504 aa26.03■■□□□ 1.76
SPG7-222ENST00000569820 CCDC180Q9P1Z9 1646 aa22.63■■□□□ 1.21
SPG7-222ENST00000569820 ZCCHC6Q5VYS8 1495 aaKnown RBP21.93■■□□□ 1.1
SPG7-222ENST00000569820 DCAF1Q9Y4B6 1507 aa21.51■■□□□ 1.03
SPG7-222ENST00000569820 SHROOM4Q9ULL8 1493 aa21.38■■□□□ 1.01
SPG7-222ENST00000569820 DCAF8L2P0C7V8 631 aa21.33■■□□□ 1.01
SPG7-222ENST00000569820 ABCC9O60706 1549 aa21.18■□□□□ 0.98
SPG7-222ENST00000569820 MYO15BQ96JP2 1530 aa21.16■□□□□ 0.98
SPG7-222ENST00000569820 NACADO15069 1562 aa20.98■□□□□ 0.95
SPG7-222ENST00000569820 SCRIBQ14160 1630 aa20.86■□□□□ 0.93
SPG7-222ENST00000569820 RB1CC1Q8TDY2 1594 aa20.75■□□□□ 0.91
SPG7-222ENST00000569820 SUPT5HO00267 1087 aaKnown RBP20.64■□□□□ 0.89
SPG7-222ENST00000569820 UNC13AQ9UPW8 1703 aa20.47■□□□□ 0.87
SPG7-222ENST00000569820 RSF1Q96T23 1441 aaPredicted RBP20.27■□□□□ 0.84
SPG7-222ENST00000569820 CECR2Q9BXF3 1484 aa20.23■□□□□ 0.83
SPG7-222ENST00000569820 BICRAQ9NZM4 1560 aa20.19■□□□□ 0.82
SPG7-222ENST00000569820 MROH2BQ7Z745 1585 aa20.15■□□□□ 0.82
SPG7-222ENST00000569820 PELP1Q8IZL8 1130 aaKnown RBP20.09■□□□□ 0.81
SPG7-222ENST00000569820 BAZ1AQ9NRL2 1556 aaPredicted RBP20.07■□□□□ 0.8
SPG7-222ENST00000569820 WIZO95785 1651 aa20.02■□□□□ 0.8
SPG7-222ENST00000569820 SMARCA4P51532 1647 aa20■□□□□ 0.79
SPG7-222ENST00000569820 PABPN1Q86U42 306 aaKnown RBP eCLIP19.97■□□□□ 0.793e-7■■■□□ 17.3
SPG7-222ENST00000569820 HRCP23327 699 aa19.89■□□□□ 0.77
SPG7-222ENST00000569820 CHIC1Q5VXU3 224 aa19.87■□□□□ 0.77
SPG7-222ENST00000569820 TOP2AP11388 1531 aaKnown RBP19.78■□□□□ 0.76
SPG7-222ENST00000569820 PEG3Q9GZU2 1588 aa19.73■□□□□ 0.75
SPG7-222ENST00000569820 MYT1Q01538 1121 aa19.65■□□□□ 0.74
SPG7-222ENST00000569820 SMARCA2P51531 1590 aa19.63■□□□□ 0.73
SPG7-222ENST00000569820 EIF4G1Q04637 1599 aaKnown RBP19.61■□□□□ 0.73
SPG7-222ENST00000569820 ATAD2BQ9ULI0 1458 aa19.57■□□□□ 0.72
SPG7-222ENST00000569820 CCDC88BA6NC98 1476 aa19.56■□□□□ 0.72
SPG7-222ENST00000569820 BAZ1BQ9UIG0 1483 aaKnown RBP19.47■□□□□ 0.71
SPG7-222ENST00000569820 PCGF6Q9BYE7 350 aa19.43■□□□□ 0.7
SPG7-222ENST00000569820 PPARGC1BQ86YN6 1023 aaKnown RBP19.39■□□□□ 0.69
SPG7-222ENST00000569820 HMGXB3Q12766 1538 aa19.38■□□□□ 0.69
SPG7-222ENST00000569820 TRIM41Q8WV44 630 aa19.35■□□□□ 0.69
SPG7-222ENST00000569820 NCAPD3P42695 1498 aa19.35■□□□□ 0.69
SPG7-222ENST00000569820 ABCC8Q09428 1581 aa19.28■□□□□ 0.68
SPG7-222ENST00000569820 CC2D2AQ9P2K1 1620 aa19.19■□□□□ 0.66
SPG7-222ENST00000569820 LOC105371045A0A1W2PR82 267 aa19.13■□□□□ 0.65
SPG7-222ENST00000569820 WRNQ14191 1432 aaPredicted RBP eCLIP19.06■□□□□ 0.64
SPG7-222ENST00000569820 SYNJ1O43426 1573 aa19.04■□□□□ 0.64
SPG7-222ENST00000569820 FAM9AQ8IZU1 332 aaPredicted RBP19.04■□□□□ 0.64
SPG7-222ENST00000569820 PRDM2Q13029 1718 aa19.01■□□□□ 0.63
SPG7-222ENST00000569820 CFTRP13569 1480 aa18.99■□□□□ 0.63
SPG7-222ENST00000569820 TOP2BQ02880 1626 aa18.92■□□□□ 0.62
SPG7-222ENST00000569820 BIVM-ERCC5R4GMW8 1640 aa18.92■□□□□ 0.62
SPG7-222ENST00000569820 SOGA1O94964 1423 aa18.92■□□□□ 0.62
SPG7-222ENST00000569820 EEA1Q15075 1411 aa18.87■□□□□ 0.61
SPG7-222ENST00000569820 TRIM26Q12899 539 aaPredicted RBP18.86■□□□□ 0.61
SPG7-222ENST00000569820 RUSC2Q8N2Y8 1516 aa18.85■□□□□ 0.61
SPG7-222ENST00000569820 CADPSQ9ULU8 1353 aa18.85■□□□□ 0.61
SPG7-222ENST00000569820 CUX1P39880 1505 aa18.83■□□□□ 0.6
SPG7-222ENST00000569820 SCAF1Q9H7N4 1312 aaKnown RBP18.79■□□□□ 0.6
SPG7-222ENST00000569820 EHMT2Q96KQ7 1210 aa18.78■□□□□ 0.6
SPG7-222ENST00000569820 ZEB1P37275 1124 aaPredicted RBP18.77■□□□□ 0.59
SPG7-222ENST00000569820 TTBK1Q5TCY1 1321 aaPredicted RBP18.74■□□□□ 0.59
SPG7-222ENST00000569820 CSRNP3Q8WYN3 585 aa18.72■□□□□ 0.59
SPG7-222ENST00000569820 KIF21BO75037 1637 aa18.69■□□□□ 0.58
SPG7-222ENST00000569820 NESP48681 1621 aa18.69■□□□□ 0.58
SPG7-222ENST00000569820 LAMC3Q9Y6N6 1575 aa18.68■□□□□ 0.58
SPG7-222ENST00000569820 FANCD2Q9BXW9 1451 aa18.68■□□□□ 0.58
SPG7-222ENST00000569820 GOLGA3Q08378 1498 aa18.65■□□□□ 0.58
SPG7-222ENST00000569820 DNAJC5BQ9UF47 199 aa18.63■□□□□ 0.57
SPG7-222ENST00000569820 CEP164Q9UPV0 1460 aa18.62■□□□□ 0.57
SPG7-222ENST00000569820 TNIKQ9UKE5 1360 aa18.61■□□□□ 0.57
SPG7-222ENST00000569820 DNMBPQ6XZF7 1577 aa18.57■□□□□ 0.56
SPG7-222ENST00000569820 CEP162Q5TB80 1403 aa18.57■□□□□ 0.56
SPG7-222ENST00000569820 FGD5Q6ZNL6 1462 aa18.56■□□□□ 0.56
SPG7-222ENST00000569820 KIF27Q86VH2 1401 aa18.53■□□□□ 0.56
SPG7-222ENST00000569820 RAPGEF2Q9Y4G8 1499 aa18.53■□□□□ 0.56
SPG7-222ENST00000569820 TOPBP1Q92547 1522 aa18.51■□□□□ 0.55
SPG7-222ENST00000569820 KIF21AQ7Z4S6 1674 aa18.51■□□□□ 0.55
SPG7-222ENST00000569820 ERICH3Q5RHP9 1530 aa18.5■□□□□ 0.55
SPG7-222ENST00000569820 PRXQ9BXM0 1461 aa18.5■□□□□ 0.55
SPG7-222ENST00000569820 UBTFP17480 764 aaKnown RBP18.49■□□□□ 0.55
SPG7-222ENST00000569820 PDS5BQ9NTI5 1447 aa18.47■□□□□ 0.55
SPG7-222ENST00000569820 CUX2O14529 1486 aa18.46■□□□□ 0.55
SPG7-222ENST00000569820 URB2Q14146 1524 aaKnown RBP18.46■□□□□ 0.55
SPG7-222ENST00000569820 POLA1P09884 1462 aaPredicted RBP18.45■□□□□ 0.54
SPG7-222ENST00000569820 WDR97A6NE52 1622 aa18.4■□□□□ 0.54
SPG7-222ENST00000569820 ABCA10Q8WWZ4 1543 aa18.39■□□□□ 0.54
SPG7-222ENST00000569820 RAD54L2Q9Y4B4 1467 aa18.38■□□□□ 0.53
SPG7-222ENST00000569820 ACIN1Q9UKV3 1341 aaKnown RBP18.36■□□□□ 0.53
SPG7-222ENST00000569820 CLIP1P30622 1438 aa18.35■□□□□ 0.53
SPG7-222ENST00000569820 IGF1RP08069 1367 aa18.35■□□□□ 0.53
SPG7-222ENST00000569820 ABCA5Q8WWZ7 1642 aa18.28■□□□□ 0.52
SPG7-222ENST00000569820 NEUROD1Q13562 356 aa18.27■□□□□ 0.52
SPG7-222ENST00000569820 MRC2Q9UBG0 1479 aa18.26■□□□□ 0.51
SPG7-222ENST00000569820 TARBP1Q13395 1621 aaKnown RBP18.26■□□□□ 0.51
SPG7-222ENST00000569820 CARMIL1Q5VZK9 1371 aa18.25■□□□□ 0.51
SPG7-222ENST00000569820 CUL7Q14999 1698 aa18.25■□□□□ 0.51
SPG7-222ENST00000569820 VPS8Q8N3P4 1428 aa18.23■□□□□ 0.51
SPG7-222ENST00000569820 ARAP1Q96P48 1450 aa18.19■□□□□ 0.5
SPG7-222ENST00000569820 WDR62O43379 1518 aa18.19■□□□□ 0.5
SPG7-222ENST00000569820 GTF3C3Q9Y5Q9 886 aa18.18■□□□□ 0.5
SPG7-222ENST00000569820 CENPBP07199 599 aaPredicted RBP18.17■□□□□ 0.5
SPG7-222ENST00000569820 GAPVD1Q14C86 1478 aa18.16■□□□□ 0.5
SPG7-222ENST00000569820 RANGAP1P46060 587 aaPredicted RBP18.16■□□□□ 0.5
SPG7-222ENST00000569820 TDRD9Q8NDG6 1382 aaKnown RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms