RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 DCAF8L2P0C7V8 631 aa21.45■■□□□ 1.02
RNF43-201ENST00000407977 PELP1Q8IZL8 1130 aaKnown RBP20.96■□□□□ 0.95
RNF43-201ENST00000407977 SUPT5HO00267 1087 aaKnown RBP20.82■□□□□ 0.92
RNF43-201ENST00000407977 NISCHQ9Y2I1 1504 aa20.41■□□□□ 0.86
RNF43-201ENST00000407977 SHROOM4Q9ULL8 1493 aa20.17■□□□□ 0.82
RNF43-201ENST00000407977 MYT1Q01538 1121 aa20.15■□□□□ 0.82
RNF43-201ENST00000407977 APLP2Q06481 763 aa20.11■□□□□ 0.81
RNF43-201ENST00000407977 CENPBP07199 599 aaPredicted RBP20.1■□□□□ 0.81
RNF43-201ENST00000407977 ZEB1P37275 1124 aaPredicted RBP20.05■□□□□ 0.8
RNF43-201ENST00000407977 CCER1Q8TC90 406 aaPredicted RBP19.97■□□□□ 0.79
RNF43-201ENST00000407977 EHMT2Q96KQ7 1210 aa19.97■□□□□ 0.79
RNF43-201ENST00000407977 PCGF6Q9BYE7 350 aa19.95■□□□□ 0.78
RNF43-201ENST00000407977 ERICH6Q7L0X2 663 aa19.92■□□□□ 0.78
RNF43-201ENST00000407977 FAM9AQ8IZU1 332 aaPredicted RBP19.6■□□□□ 0.73
RNF43-201ENST00000407977 NEFLP07196 543 aa19.53■□□□□ 0.72
RNF43-201ENST00000407977 TTBK1Q5TCY1 1321 aaPredicted RBP19.43■□□□□ 0.7
RNF43-201ENST00000407977 TRIM41Q8WV44 630 aa19.39■□□□□ 0.69
RNF43-201ENST00000407977 YTHDC1Q96MU7 727 aaKnown RBP19.23■□□□□ 0.67
RNF43-201ENST00000407977 HRCP23327 699 aa19.2■□□□□ 0.66
RNF43-201ENST00000407977 TRIM26Q12899 539 aaPredicted RBP19.2■□□□□ 0.66
RNF43-201ENST00000407977 UBTFP17480 764 aaKnown RBP19.13■□□□□ 0.65
RNF43-201ENST00000407977 RANGAP1P46060 587 aaPredicted RBP19.05■□□□□ 0.64
RNF43-201ENST00000407977 ATP1B4Q9UN42 357 aaPredicted RBP18.99■□□□□ 0.63
RNF43-201ENST00000407977 DAXXQ9UER7 740 aaPredicted RBP18.97■□□□□ 0.63
RNF43-201ENST00000407977 PPARGC1BQ86YN6 1023 aaKnown RBP18.72■□□□□ 0.59
RNF43-201ENST00000407977 RTL5Q5HYW3 569 aaPredicted RBP18.7■□□□□ 0.58
RNF43-201ENST00000407977 DIEXFQ68CQ4 756 aaKnown RBP18.62■□□□□ 0.57
RNF43-201ENST00000407977 CHIC1Q5VXU3 224 aa18.61■□□□□ 0.57
RNF43-201ENST00000407977 LOC105371045A0A1W2PR82 267 aa18.51■□□□□ 0.55
RNF43-201ENST00000407977 ZNF316A6NFI3 1004 aaPredicted RBP18.5■□□□□ 0.55
RNF43-201ENST00000407977 HNRNPUL2Q1KMD3 747 aaKnown RBP18.5■□□□□ 0.55
RNF43-201ENST00000407977 ITGAEP38570 1179 aa18.48■□□□□ 0.55
RNF43-201ENST00000407977 POLR3GLQ9BT43 218 aa18.46■□□□□ 0.55
RNF43-201ENST00000407977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.38■□□□□ 0.53
RNF43-201ENST00000407977 GTF3C3Q9Y5Q9 886 aa18.37■□□□□ 0.53
RNF43-201ENST00000407977 CLSPNQ9HAW4 1339 aa18.35■□□□□ 0.53
RNF43-201ENST00000407977 CDK11AQ9UQ88 783 aaPredicted RBP18.29■□□□□ 0.52
RNF43-201ENST00000407977 ANP32CO43423 234 aa18.18■□□□□ 0.5
RNF43-201ENST00000407977 ACIN1Q9UKV3 1341 aaKnown RBP18.18■□□□□ 0.5
RNF43-201ENST00000407977 CNGB1Q14028 1251 aaPredicted RBP18.18■□□□□ 0.5
RNF43-201ENST00000407977 MYT1LQ9UL68 1186 aa18.17■□□□□ 0.5
RNF43-201ENST00000407977 BCANQ96GW7 911 aa18.12■□□□□ 0.49
RNF43-201ENST00000407977 FAM50AQ14320 339 aaKnown RBP18.05■□□□□ 0.48
RNF43-201ENST00000407977 ANP32AP39687 249 aaKnown RBP18.02■□□□□ 0.48
RNF43-201ENST00000407977 SLC4A1APQ9BWU0 796 aaKnown RBP18.02■□□□□ 0.48
RNF43-201ENST00000407977 NEUROD1Q13562 356 aa17.98■□□□□ 0.47
RNF43-201ENST00000407977 TRIM52Q96A61 297 aa17.98■□□□□ 0.47
RNF43-201ENST00000407977 ZBTB47Q9UFB7 747 aaPredicted RBP17.97■□□□□ 0.47
RNF43-201ENST00000407977 GLIPR1L2Q4G1C9 344 aa17.81■□□□□ 0.44
RNF43-201ENST00000407977 CANXP27824 592 aaKnown RBP17.81■□□□□ 0.44
RNF43-201ENST00000407977 ANP32BQ92688 251 aaKnown RBP17.77■□□□□ 0.44
RNF43-201ENST00000407977 EIF5BO60841 1220 aaKnown RBP17.74■□□□□ 0.43
RNF43-201ENST00000407977 ZNF326Q5BKZ1 582 aaKnown RBP17.73■□□□□ 0.43
RNF43-201ENST00000407977 FKBP8Q14318 412 aa17.72■□□□□ 0.43
RNF43-201ENST00000407977 NEFMP07197 916 aa17.7■□□□□ 0.42
RNF43-201ENST00000407977 DCAF1Q9Y4B6 1507 aa17.68■□□□□ 0.42
RNF43-201ENST00000407977 NPM2Q86SE8 214 aaKnown RBP17.67■□□□□ 0.42
RNF43-201ENST00000407977 UPF2Q9HAU5 1272 aaKnown RBP17.64■□□□□ 0.41
RNF43-201ENST00000407977 CSRNP3Q8WYN3 585 aa17.61■□□□□ 0.41
RNF43-201ENST00000407977 HNRNPUQ00839 825 aaKnown RBP eCLIP17.56■□□□□ 0.42e-6■■□□□ 12.8
RNF43-201ENST00000407977 HSP90AA1P07900 732 aaKnown RBP17.55■□□□□ 0.4
RNF43-201ENST00000407977 TONSLQ96HA7 1378 aa17.54■□□□□ 0.4
RNF43-201ENST00000407977 CCDC136Q96JN2 1154 aa17.5■□□□□ 0.39
RNF43-201ENST00000407977 SCAF1Q9H7N4 1312 aaKnown RBP17.48■□□□□ 0.39
RNF43-201ENST00000407977 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.47■□□□□ 0.39
RNF43-201ENST00000407977 DDX10Q13206 875 aaKnown RBP17.45■□□□□ 0.38
RNF43-201ENST00000407977 NBR1Q14596 966 aa17.42■□□□□ 0.38
RNF43-201ENST00000407977 BCL11AQ9H165 835 aa17.41■□□□□ 0.38
RNF43-201ENST00000407977 FAM9BQ8IZU0 186 aa17.4■□□□□ 0.38
RNF43-201ENST00000407977 ANP32EQ9BTT0 268 aa17.38■□□□□ 0.37
RNF43-201ENST00000407977 SLC24A1O60721 1099 aa17.37■□□□□ 0.37
RNF43-201ENST00000407977 TMC1Q8TDI8 760 aa17.36■□□□□ 0.37
RNF43-201ENST00000407977 DDRGK1Q96HY6 314 aa17.35■□□□□ 0.37
RNF43-201ENST00000407977 MIER1Q8N108 512 aa17.3■□□□□ 0.36
RNF43-201ENST00000407977 MRS2Q9HD23 443 aa17.3■□□□□ 0.36
RNF43-201ENST00000407977 P3H3Q8IVL6 736 aa17.29■□□□□ 0.36
RNF43-201ENST00000407977 BECN1Q14457 450 aa17.27■□□□□ 0.35
RNF43-201ENST00000407977 PABPN1Q86U42 306 aaKnown RBP eCLIP17.26■□□□□ 0.35
RNF43-201ENST00000407977 WDR43Q15061 677 aaKnown RBP eCLIP17.23■□□□□ 0.35
RNF43-201ENST00000407977 ZNF777Q9ULD5 760 aaPredicted RBP17.23■□□□□ 0.35
RNF43-201ENST00000407977 TRIM44Q96DX7 344 aaPredicted RBP17.21■□□□□ 0.35
RNF43-201ENST00000407977 PPM1GO15355 546 aaPredicted RBP17.2■□□□□ 0.34
RNF43-201ENST00000407977 FBLN2P98095 1184 aa17.19■□□□□ 0.34
RNF43-201ENST00000407977 ERICH6BQ5W0A0 696 aa17.19■□□□□ 0.34
RNF43-201ENST00000407977 SALL2Q9Y467 1007 aaPredicted RBP17.17■□□□□ 0.34
RNF43-201ENST00000407977 TNNT2P45379 298 aaPredicted RBP17.17■□□□□ 0.34
RNF43-201ENST00000407977 GOLGA6L22H0YM25 854 aa17.16■□□□□ 0.34
RNF43-201ENST00000407977 ABCC9O60706 1549 aa17.16■□□□□ 0.34
RNF43-201ENST00000407977 EIF4G2P78344 907 aaKnown RBP eCLIP17.15■□□□□ 0.34
RNF43-201ENST00000407977 ARXQ96QS3 562 aa17.14■□□□□ 0.33
RNF43-201ENST00000407977 MYH16Q9H6N6 1097 aa17.13■□□□□ 0.33
RNF43-201ENST00000407977 ARID3CA6NKF2 412 aa17.11■□□□□ 0.33
RNF43-201ENST00000407977 NCLP19338 710 aaKnown RBP17.11■□□□□ 0.33
RNF43-201ENST00000407977 IRX6P78412 446 aaPredicted RBP17.1■□□□□ 0.33
RNF43-201ENST00000407977 PPP4R2Q9NY27 417 aa17.04■□□□□ 0.32
RNF43-201ENST00000407977 CHGAP10645 457 aaKnown RBP17.02■□□□□ 0.31
RNF43-201ENST00000407977 CLIP1P30622 1438 aa17.01■□□□□ 0.31
RNF43-201ENST00000407977 CCDC180Q9P1Z9 1646 aa17■□□□□ 0.31
RNF43-201ENST00000407977 EEA1Q15075 1411 aa17■□□□□ 0.31
RNF43-201ENST00000407977 TSPY4P0CV99 314 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms