RNA–Protein interactions for RNA: ENST00000615544.4

ACTG1-216, Transcript of actin gamma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTG1, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG1-216ENST00000615544 NISCHQ9Y2I1 1504 aa29.82■■■□□ 2.36
ACTG1-216ENST00000615544 CCDC180Q9P1Z9 1646 aa26.42■■□□□ 1.82
ACTG1-216ENST00000615544 ABCC9O60706 1549 aa25.6■■□□□ 1.69
ACTG1-216ENST00000615544 ZCCHC6Q5VYS8 1495 aaKnown RBP24.92■■□□□ 1.58
ACTG1-216ENST00000615544 DCAF8L2P0C7V8 631 aa24.8■■□□□ 1.56
ACTG1-216ENST00000615544 NACADO15069 1562 aa24.72■■□□□ 1.55
ACTG1-216ENST00000615544 RB1CC1Q8TDY2 1594 aa24.71■■□□□ 1.55
ACTG1-216ENST00000615544 DCAF1Q9Y4B6 1507 aa24.64■■□□□ 1.53
ACTG1-216ENST00000615544 MYO15BQ96JP2 1530 aa24.62■■□□□ 1.53
ACTG1-216ENST00000615544 UNC13AQ9UPW8 1703 aa24.26■■□□□ 1.47
ACTG1-216ENST00000615544 SCRIBQ14160 1630 aa24.19■■□□□ 1.46
ACTG1-216ENST00000615544 BICRAQ9NZM4 1560 aa23.99■■□□□ 1.43
ACTG1-216ENST00000615544 PABPN1Q86U42 306 aaKnown RBP eCLIP23.94■■□□□ 1.42
ACTG1-216ENST00000615544 SHROOM4Q9ULL8 1493 aa23.81■■□□□ 1.4
ACTG1-216ENST00000615544 EIF4G1Q04637 1599 aaKnown RBP23.32■■□□□ 1.32
ACTG1-216ENST00000615544 CECR2Q9BXF3 1484 aa23.23■■□□□ 1.31
ACTG1-216ENST00000615544 DNAJC5BQ9UF47 199 aa23.19■■□□□ 1.3
ACTG1-216ENST00000615544 CC2D2AQ9P2K1 1620 aa23.17■■□□□ 1.3
ACTG1-216ENST00000615544 SMARCA4P51532 1647 aa23.13■■□□□ 1.29
ACTG1-216ENST00000615544 BAZ1AQ9NRL2 1556 aaPredicted RBP23.1■■□□□ 1.29
ACTG1-216ENST00000615544 MROH2BQ7Z745 1585 aa23.02■■□□□ 1.28
ACTG1-216ENST00000615544 ATAD2BQ9ULI0 1458 aa22.88■■□□□ 1.25
ACTG1-216ENST00000615544 SMARCA2P51531 1590 aa22.86■■□□□ 1.25
ACTG1-216ENST00000615544 PEG3Q9GZU2 1588 aa22.84■■□□□ 1.25
ACTG1-216ENST00000615544 WIZO95785 1651 aa22.83■■□□□ 1.24
ACTG1-216ENST00000615544 RSF1Q96T23 1441 aaPredicted RBP22.82■■□□□ 1.24
ACTG1-216ENST00000615544 NCAPD3P42695 1498 aa22.78■■□□□ 1.24
ACTG1-216ENST00000615544 HMGXB3Q12766 1538 aa22.75■■□□□ 1.23
ACTG1-216ENST00000615544 BAZ1BQ9UIG0 1483 aaKnown RBP22.73■■□□□ 1.23
ACTG1-216ENST00000615544 TOP2AP11388 1531 aaKnown RBP22.56■■□□□ 1.2
ACTG1-216ENST00000615544 SUPT5HO00267 1087 aaKnown RBP22.48■■□□□ 1.19
ACTG1-216ENST00000615544 CCDC88BA6NC98 1476 aa22.27■■□□□ 1.15
ACTG1-216ENST00000615544 NESP48681 1621 aa22.25■■□□□ 1.15
ACTG1-216ENST00000615544 LAMC3Q9Y6N6 1575 aa22.18■■□□□ 1.14
ACTG1-216ENST00000615544 CADPSQ9ULU8 1353 aa22.14■■□□□ 1.13
ACTG1-216ENST00000615544 CFTRP13569 1480 aa22.09■■□□□ 1.13
ACTG1-216ENST00000615544 PRDM2Q13029 1718 aa22.05■■□□□ 1.12
ACTG1-216ENST00000615544 KIF21AQ7Z4S6 1674 aa22.04■■□□□ 1.12
ACTG1-216ENST00000615544 ERCC6Q03468 1493 aa22.02■■□□□ 1.12
ACTG1-216ENST00000615544 PDS5BQ9NTI5 1447 aa21.98■■□□□ 1.11
ACTG1-216ENST00000615544 FANCD2Q9BXW9 1451 aa21.93■■□□□ 1.1
ACTG1-216ENST00000615544 CEP164Q9UPV0 1460 aa21.89■■□□□ 1.09
ACTG1-216ENST00000615544 THOC2Q8NI27 1593 aaKnown RBP21.86■■□□□ 1.09
ACTG1-216ENST00000615544 MRC2Q9UBG0 1479 aa21.79■■□□□ 1.08
ACTG1-216ENST00000615544 WDR62O43379 1518 aa21.72■■□□□ 1.07
ACTG1-216ENST00000615544 URB2Q14146 1524 aaKnown RBP21.72■■□□□ 1.07
ACTG1-216ENST00000615544 CUX2O14529 1486 aa21.64■■□□□ 1.05
ACTG1-216ENST00000615544 DNMBPQ6XZF7 1577 aa21.63■■□□□ 1.05
ACTG1-216ENST00000615544 ABCC8Q09428 1581 aa21.62■■□□□ 1.05
ACTG1-216ENST00000615544 TOPBP1Q92547 1522 aa21.62■■□□□ 1.05
ACTG1-216ENST00000615544 CUX1P39880 1505 aa21.59■■□□□ 1.05
ACTG1-216ENST00000615544 WRNQ14191 1432 aaPredicted RBP eCLIP21.52■■□□□ 1.041e-8■□□□□ 10.4
ACTG1-216ENST00000615544 SYNJ1O43426 1573 aa21.52■■□□□ 1.03
ACTG1-216ENST00000615544 BIVM-ERCC5R4GMW8 1640 aa21.47■■□□□ 1.03
ACTG1-216ENST00000615544 POLA1P09884 1462 aaPredicted RBP21.47■■□□□ 1.03
ACTG1-216ENST00000615544 FGD5Q6ZNL6 1462 aa21.47■■□□□ 1.03
ACTG1-216ENST00000615544 TOP2BQ02880 1626 aa21.46■■□□□ 1.03
ACTG1-216ENST00000615544 TARBP1Q13395 1621 aaKnown RBP21.39■■□□□ 1.01
ACTG1-216ENST00000615544 IFT140Q96RY7 1462 aa21.38■■□□□ 1.01
ACTG1-216ENST00000615544 RAD54L2Q9Y4B4 1467 aa21.38■■□□□ 1.01
ACTG1-216ENST00000615544 SOGA1O94964 1423 aa21.33■■□□□ 1.01
ACTG1-216ENST00000615544 ZNF608Q9ULD9 1512 aaPredicted RBP21.32■■□□□ 1
ACTG1-216ENST00000615544 WDR97A6NE52 1622 aa21.32■■□□□ 1
ACTG1-216ENST00000615544 EIF4G3O43432 1585 aaKnown RBP21.28■■□□□ 1
ACTG1-216ENST00000615544 ABCA10Q8WWZ4 1543 aa21.23■□□□□ 0.99
ACTG1-216ENST00000615544 TDRD9Q8NDG6 1382 aaKnown RBP21.21■□□□□ 0.99
ACTG1-216ENST00000615544 AQRO60306 1485 aaKnown RBP eCLIP21.21■□□□□ 0.994e-13■■■■■ 34.6
ACTG1-216ENST00000615544 ABCA5Q8WWZ7 1642 aa21.18■□□□□ 0.98
ACTG1-216ENST00000615544 TRIM41Q8WV44 630 aa21.17■□□□□ 0.98
ACTG1-216ENST00000615544 PBRM1Q86U86 1689 aa21.14■□□□□ 0.98
ACTG1-216ENST00000615544 GAPVD1Q14C86 1478 aa21.12■□□□□ 0.97
ACTG1-216ENST00000615544 CHIC1Q5VXU3 224 aa21.11■□□□□ 0.97
ACTG1-216ENST00000615544 GRIN2BQ13224 1484 aa21.06■□□□□ 0.96
ACTG1-216ENST00000615544 SNAPC4Q5SXM2 1469 aa21.05■□□□□ 0.96
ACTG1-216ENST00000615544 KIF27Q86VH2 1401 aa21.02■□□□□ 0.96
ACTG1-216ENST00000615544 RUSC2Q8N2Y8 1516 aa20.99■□□□□ 0.95
ACTG1-216ENST00000615544 CHD1O14646 1710 aa20.98■□□□□ 0.95
ACTG1-216ENST00000615544 MAGI1Q96QZ7 1491 aaPredicted RBP20.98■□□□□ 0.95
ACTG1-216ENST00000615544 ERICH3Q5RHP9 1530 aa20.98■□□□□ 0.95
ACTG1-216ENST00000615544 ADAMTS12P58397 1594 aa20.97■□□□□ 0.95
ACTG1-216ENST00000615544 DNAJC5Q9H3Z4 198 aa20.9■□□□□ 0.94
ACTG1-216ENST00000615544 SYNJ2O15056 1496 aa20.9■□□□□ 0.94
ACTG1-216ENST00000615544 FBLN2P98095 1184 aa20.9■□□□□ 0.94
ACTG1-216ENST00000615544 CUL7Q14999 1698 aa20.88■□□□□ 0.93
ACTG1-216ENST00000615544 IGF1RP08069 1367 aa20.88■□□□□ 0.93
ACTG1-216ENST00000615544 FHAD1B1AJZ9 1412 aa20.86■□□□□ 0.93
ACTG1-216ENST00000615544 CHMP7Q8WUX9 453 aaPredicted RBP20.84■□□□□ 0.93
ACTG1-216ENST00000615544 GRIN2AQ12879 1464 aa20.82■□□□□ 0.92
ACTG1-216ENST00000615544 FAM9AQ8IZU1 332 aaPredicted RBP20.8■□□□□ 0.92
ACTG1-216ENST00000615544 CARMIL1Q5VZK9 1371 aa20.78■□□□□ 0.92
ACTG1-216ENST00000615544 EEA1Q15075 1411 aa20.78■□□□□ 0.92
ACTG1-216ENST00000615544 OSCARQ8IYS5 282 aa20.75■□□□□ 0.91
ACTG1-216ENST00000615544 CEP170Q5SW79 1584 aa20.74■□□□□ 0.91
ACTG1-216ENST00000615544 CSRNP3Q8WYN3 585 aa20.7■□□□□ 0.9
ACTG1-216ENST00000615544 PRXQ9BXM0 1461 aa20.7■□□□□ 0.9
ACTG1-216ENST00000615544 RAPGEF2Q9Y4G8 1499 aa20.7■□□□□ 0.9
ACTG1-216ENST00000615544 CLASP1Q7Z460 1538 aa20.7■□□□□ 0.9
ACTG1-216ENST00000615544 NUP160Q12769 1436 aa20.69■□□□□ 0.9
ACTG1-216ENST00000615544 KIF21BO75037 1637 aa20.62■□□□□ 0.89
ACTG1-216ENST00000615544 CTTNBP2Q8WZ74 1663 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms