RNA–Protein interactions for RNA: ENST00000572105.6

ACTG1-205, Transcript of actin gamma 1, humanhuman

TSL 5

Gene ACTG1, Length 1,168 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTG1-205ENST00000572105 NISCHQ9Y2I1 1504 aa33.75■■■□□ 2.99
ACTG1-205ENST00000572105 CCDC180Q9P1Z9 1646 aa30.09■■■□□ 2.41
ACTG1-205ENST00000572105 ABCC9O60706 1549 aa29.28■■■□□ 2.28
ACTG1-205ENST00000572105 RB1CC1Q8TDY2 1594 aa28.26■■■□□ 2.11
ACTG1-205ENST00000572105 NACADO15069 1562 aa28.22■■■□□ 2.11
ACTG1-205ENST00000572105 DCAF8L2P0C7V8 631 aa28.16■■■□□ 2.1
ACTG1-205ENST00000572105 ZCCHC6Q5VYS8 1495 aaKnown RBP28.15■■■□□ 2.1
ACTG1-205ENST00000572105 MYO15BQ96JP2 1530 aa28.04■■■□□ 2.08
ACTG1-205ENST00000572105 DCAF1Q9Y4B6 1507 aa27.95■■■□□ 2.06
ACTG1-205ENST00000572105 UNC13AQ9UPW8 1703 aa27.67■■■□□ 2.02
ACTG1-205ENST00000572105 SCRIBQ14160 1630 aa27.42■■□□□ 1.98
ACTG1-205ENST00000572105 BICRAQ9NZM4 1560 aa27.34■■□□□ 1.97
ACTG1-205ENST00000572105 PABPN1Q86U42 306 aaKnown RBP eCLIP27.31■■□□□ 1.96
ACTG1-205ENST00000572105 SHROOM4Q9ULL8 1493 aa27.12■■□□□ 1.93
ACTG1-205ENST00000572105 DNAJC5BQ9UF47 199 aa26.69■■□□□ 1.86
ACTG1-205ENST00000572105 EIF4G1Q04637 1599 aaKnown RBP26.65■■□□□ 1.86
ACTG1-205ENST00000572105 CC2D2AQ9P2K1 1620 aa26.53■■□□□ 1.84
ACTG1-205ENST00000572105 CECR2Q9BXF3 1484 aa26.31■■□□□ 1.8
ACTG1-205ENST00000572105 SMARCA4P51532 1647 aa26.22■■□□□ 1.79
ACTG1-205ENST00000572105 BAZ1AQ9NRL2 1556 aaPredicted RBP26.2■■□□□ 1.79
ACTG1-205ENST00000572105 SMARCA2P51531 1590 aa26.04■■□□□ 1.76
ACTG1-205ENST00000572105 MROH2BQ7Z745 1585 aa26■■□□□ 1.75
ACTG1-205ENST00000572105 ATAD2BQ9ULI0 1458 aa26■■□□□ 1.75
ACTG1-205ENST00000572105 NCAPD3P42695 1498 aa25.97■■□□□ 1.75
ACTG1-205ENST00000572105 PEG3Q9GZU2 1588 aa25.95■■□□□ 1.74
ACTG1-205ENST00000572105 HMGXB3Q12766 1538 aa25.92■■□□□ 1.74
ACTG1-205ENST00000572105 BAZ1BQ9UIG0 1483 aaKnown RBP25.85■■□□□ 1.73
ACTG1-205ENST00000572105 WIZO95785 1651 aa25.78■■□□□ 1.72
ACTG1-205ENST00000572105 RSF1Q96T23 1441 aaPredicted RBP25.71■■□□□ 1.71
ACTG1-205ENST00000572105 TOP2AP11388 1531 aaKnown RBP25.51■■□□□ 1.67
ACTG1-205ENST00000572105 LAMC3Q9Y6N6 1575 aa25.36■■□□□ 1.65
ACTG1-205ENST00000572105 NESP48681 1621 aa25.34■■□□□ 1.65
ACTG1-205ENST00000572105 ERCC6Q03468 1493 aa25.29■■□□□ 1.64
ACTG1-205ENST00000572105 CADPSQ9ULU8 1353 aa25.22■■□□□ 1.63
ACTG1-205ENST00000572105 PDS5BQ9NTI5 1447 aa25.15■■□□□ 1.62
ACTG1-205ENST00000572105 KIF21AQ7Z4S6 1674 aa25.15■■□□□ 1.62
ACTG1-205ENST00000572105 CCDC88BA6NC98 1476 aa25.15■■□□□ 1.62
ACTG1-205ENST00000572105 SUPT5HO00267 1087 aaKnown RBP25.11■■□□□ 1.61
ACTG1-205ENST00000572105 CFTRP13569 1480 aa25.09■■□□□ 1.61
ACTG1-205ENST00000572105 PRDM2Q13029 1718 aa25.09■■□□□ 1.61
ACTG1-205ENST00000572105 THOC2Q8NI27 1593 aaKnown RBP25.01■■□□□ 1.59
ACTG1-205ENST00000572105 CUX2O14529 1486 aa24.97■■□□□ 1.59
ACTG1-205ENST00000572105 FANCD2Q9BXW9 1451 aa24.96■■□□□ 1.59
ACTG1-205ENST00000572105 CEP164Q9UPV0 1460 aa24.96■■□□□ 1.59
ACTG1-205ENST00000572105 MRC2Q9UBG0 1479 aa24.89■■□□□ 1.58
ACTG1-205ENST00000572105 WDR62O43379 1518 aa24.81■■□□□ 1.56
ACTG1-205ENST00000572105 URB2Q14146 1524 aaKnown RBP24.7■■□□□ 1.54
ACTG1-205ENST00000572105 ABCC8Q09428 1581 aa24.61■■□□□ 1.53
ACTG1-205ENST00000572105 DNMBPQ6XZF7 1577 aa24.59■■□□□ 1.53
ACTG1-205ENST00000572105 TOPBP1Q92547 1522 aa24.57■■□□□ 1.52
ACTG1-205ENST00000572105 IFT140Q96RY7 1462 aa24.41■■□□□ 1.5
ACTG1-205ENST00000572105 CUX1P39880 1505 aa24.4■■□□□ 1.5
ACTG1-205ENST00000572105 POLA1P09884 1462 aaPredicted RBP24.37■■□□□ 1.49
ACTG1-205ENST00000572105 FGD5Q6ZNL6 1462 aa24.32■■□□□ 1.48
ACTG1-205ENST00000572105 TARBP1Q13395 1621 aaKnown RBP24.32■■□□□ 1.48
ACTG1-205ENST00000572105 BIVM-ERCC5R4GMW8 1640 aa24.28■■□□□ 1.48
ACTG1-205ENST00000572105 WRNQ14191 1432 aaPredicted RBP eCLIP24.27■■□□□ 1.481e-8■□□□□ 10.4
ACTG1-205ENST00000572105 ZNF608Q9ULD9 1512 aaPredicted RBP24.26■■□□□ 1.47
ACTG1-205ENST00000572105 EIF4G3O43432 1585 aaKnown RBP24.25■■□□□ 1.47
ACTG1-205ENST00000572105 TOP2BQ02880 1626 aa24.25■■□□□ 1.47
ACTG1-205ENST00000572105 SOGA1O94964 1423 aa24.25■■□□□ 1.47
ACTG1-205ENST00000572105 SYNJ1O43426 1573 aa24.24■■□□□ 1.47
ACTG1-205ENST00000572105 RAD54L2Q9Y4B4 1467 aa24.23■■□□□ 1.47
ACTG1-205ENST00000572105 WDR97A6NE52 1622 aa24.18■■□□□ 1.46
ACTG1-205ENST00000572105 AQRO60306 1485 aaKnown RBP eCLIP24.13■■□□□ 1.454e-13■■■■■ 34.6
ACTG1-205ENST00000572105 TDRD9Q8NDG6 1382 aaKnown RBP24.09■■□□□ 1.45
ACTG1-205ENST00000572105 ABCA10Q8WWZ4 1543 aa24.08■■□□□ 1.45
ACTG1-205ENST00000572105 DNAJC5Q9H3Z4 198 aa24.05■■□□□ 1.44
ACTG1-205ENST00000572105 PBRM1Q86U86 1689 aa24.04■■□□□ 1.44
ACTG1-205ENST00000572105 ABCA5Q8WWZ7 1642 aa24.02■■□□□ 1.44
ACTG1-205ENST00000572105 GAPVD1Q14C86 1478 aa24■■□□□ 1.43
ACTG1-205ENST00000572105 GRIN2BQ13224 1484 aa23.99■■□□□ 1.43
ACTG1-205ENST00000572105 CHD1O14646 1710 aa23.97■■□□□ 1.43
ACTG1-205ENST00000572105 SNAPC4Q5SXM2 1469 aa23.95■■□□□ 1.42
ACTG1-205ENST00000572105 MAGI1Q96QZ7 1491 aaPredicted RBP23.94■■□□□ 1.42
ACTG1-205ENST00000572105 OSCARQ8IYS5 282 aa23.9■■□□□ 1.42
ACTG1-205ENST00000572105 FBLN2P98095 1184 aa23.86■■□□□ 1.41
ACTG1-205ENST00000572105 SYNJ2O15056 1496 aa23.83■■□□□ 1.41
ACTG1-205ENST00000572105 ERICH3Q5RHP9 1530 aa23.83■■□□□ 1.41
ACTG1-205ENST00000572105 ADAMTS12P58397 1594 aa23.8■■□□□ 1.4
ACTG1-205ENST00000572105 CHMP7Q8WUX9 453 aaPredicted RBP23.79■■□□□ 1.4
ACTG1-205ENST00000572105 KIF27Q86VH2 1401 aa23.77■■□□□ 1.4
ACTG1-205ENST00000572105 TRIM41Q8WV44 630 aa23.74■■□□□ 1.39
ACTG1-205ENST00000572105 FHAD1B1AJZ9 1412 aa23.71■■□□□ 1.39
ACTG1-205ENST00000572105 GRIN2AQ12879 1464 aa23.68■■□□□ 1.38
ACTG1-205ENST00000572105 CUL7Q14999 1698 aa23.68■■□□□ 1.38
ACTG1-205ENST00000572105 CLASP1Q7Z460 1538 aa23.64■■□□□ 1.37
ACTG1-205ENST00000572105 IGF1RP08069 1367 aa23.6■■□□□ 1.37
ACTG1-205ENST00000572105 RIMBP3CA6NJZ7 1639 aa23.58■■□□□ 1.36
ACTG1-205ENST00000572105 RIMBP3BA6NNM3 1639 aa23.58■■□□□ 1.36
ACTG1-205ENST00000572105 RIMBP3Q9UFD9 1639 aa23.58■■□□□ 1.36
ACTG1-205ENST00000572105 CEP170Q5SW79 1584 aa23.57■■□□□ 1.36
ACTG1-205ENST00000572105 ARHGEF11O15085 1522 aa23.56■■□□□ 1.36
ACTG1-205ENST00000572105 NUP160Q12769 1436 aa23.54■■□□□ 1.36
ACTG1-205ENST00000572105 RUSC2Q8N2Y8 1516 aa23.52■■□□□ 1.36
ACTG1-205ENST00000572105 CARMIL1Q5VZK9 1371 aa23.5■■□□□ 1.35
ACTG1-205ENST00000572105 CHIC1Q5VXU3 224 aa23.43■■□□□ 1.34
ACTG1-205ENST00000572105 SHROOM2Q13796 1616 aa23.41■■□□□ 1.34
ACTG1-205ENST00000572105 RAPGEF2Q9Y4G8 1499 aa23.4■■□□□ 1.34
ACTG1-205ENST00000572105 EEA1Q15075 1411 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms