RNA–Protein interactions for RNA: ENST00000480737.1

FN1-221, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 384 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-221ENST00000480737 AEBP2Q6ZN18 517 aaPredicted RBP21.25■□□□□ 0.99
FN1-221ENST00000480737 CHIC1Q5VXU3 224 aa20.43■□□□□ 0.86
FN1-221ENST00000480737 SENP3Q9H4L4 574 aaPredicted RBP18.08■□□□□ 0.48
FN1-221ENST00000480737 PHF23Q9BUL5 403 aaPredicted RBP17.92■□□□□ 0.46
FN1-221ENST00000480737 FOXD1Q16676 465 aa16.81■□□□□ 0.28
FN1-221ENST00000480737 PLPPR3Q6T4P5 718 aa16.41■□□□□ 0.22
FN1-221ENST00000480737 PPP6R1Q9UPN7 881 aa15.89■□□□□ 0.13
FN1-221ENST00000480737 ADRA2BP18089 450 aa15.81■□□□□ 0.12
FN1-221ENST00000480737 PIAS4Q8N2W9 510 aaPredicted RBP15.72■□□□□ 0.11
FN1-221ENST00000480737 MSH5O43196 834 aa15.65■□□□□ 0.1
FN1-221ENST00000480737 POTEDQ86YR6 584 aa14.85□□□□□ -0.03
FN1-221ENST00000480737 SCAF1Q9H7N4 1312 aaKnown RBP14.48□□□□□ -0.09
FN1-221ENST00000480737 MAPK8IP2Q13387 824 aaPredicted RBP14.44□□□□□ -0.1
FN1-221ENST00000480737 DMRT2Q9Y5R5 561 aa14.4□□□□□ -0.1
FN1-221ENST00000480737 PPP4R3CPQ6ZMV5 832 aa14.39□□□□□ -0.11
FN1-221ENST00000480737 CNKSR2Q8WXI2 1034 aa14.1□□□□□ -0.15
FN1-221ENST00000480737 HOXD11P31277 338 aaPredicted RBP14□□□□□ -0.17
FN1-221ENST00000480737 RNF216Q9NWF9 866 aaPredicted RBP13.93□□□□□ -0.18
FN1-221ENST00000480737 NCBP3Q53F19 620 aaKnown RBP13.9□□□□□ -0.18
FN1-221ENST00000480737 NPM3O75607 178 aaKnown RBP13.73□□□□□ -0.21
FN1-221ENST00000480737 KCNA4P22459 653 aa13.65□□□□□ -0.22
FN1-221ENST00000480737 DCAF8L1A6NGE4 600 aa13.59□□□□□ -0.23
FN1-221ENST00000480737 DNAJC5BQ9UF47 199 aa13.58□□□□□ -0.24
FN1-221ENST00000480737 RNF39Q9H2S5 420 aa13.4□□□□□ -0.26
FN1-221ENST00000480737 C1QBPQ07021 282 aaKnown RBP13.21□□□□□ -0.29
FN1-221ENST00000480737 CACNB1Q02641 598 aaPredicted RBP13.19□□□□□ -0.3
FN1-221ENST00000480737 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.19□□□□□ -0.3
FN1-221ENST00000480737 SLC4A2P04920 1241 aa13.07□□□□□ -0.32
FN1-221ENST00000480737 U3KPZ7 1027 aaPredicted RBP13.03□□□□□ -0.32
FN1-221ENST00000480737 SLC4A1APQ9BWU0 796 aaKnown RBP12.91□□□□□ -0.34
FN1-221ENST00000480737 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.73□□□□□ -0.37
FN1-221ENST00000480737 HNRNPUL2Q1KMD3 747 aaKnown RBP12.73□□□□□ -0.37
FN1-221ENST00000480737 SPINK5Q9NQ38 1064 aaPredicted RBP12.72□□□□□ -0.37
FN1-221ENST00000480737 MYCNP04198 464 aaPredicted RBP12.71□□□□□ -0.37
FN1-221ENST00000480737 FOXD4L1Q9NU39 408 aa12.69□□□□□ -0.38
FN1-221ENST00000480737 APLP2Q06481 763 aa12.67□□□□□ -0.38
FN1-221ENST00000480737 SAMD1Q6SPF0 538 aaPredicted RBP12.67□□□□□ -0.38
FN1-221ENST00000480737 CAPN15O75808 1086 aa12.63□□□□□ -0.39
FN1-221ENST00000480737 DSG3P32926 999 aa12.61□□□□□ -0.39
FN1-221ENST00000480737 ZBTB22O15209 634 aa12.6□□□□□ -0.39
FN1-221ENST00000480737 ZNF219Q9P2Y4 722 aaPredicted RBP12.57□□□□□ -0.4
FN1-221ENST00000480737 TRHP20396 242 aaPredicted RBP12.47□□□□□ -0.41
FN1-221ENST00000480737 ABCB7O75027 752 aa12.36□□□□□ -0.43
FN1-221ENST00000480737 ATF5Q9Y2D1 282 aaPredicted RBP12.36□□□□□ -0.43
FN1-221ENST00000480737 ATXN8OSP0DMR3 200 aa12.34□□□□□ -0.43
FN1-221ENST00000480737 POLA2Q14181 598 aa12.24□□□□□ -0.45
FN1-221ENST00000480737 CSRNP3Q8WYN3 585 aa12.21□□□□□ -0.45
FN1-221ENST00000480737 ZBTB12Q9Y330 459 aaPredicted RBP12.08□□□□□ -0.48
FN1-221ENST00000480737 EHMT2Q96KQ7 1210 aa12.06□□□□□ -0.48
FN1-221ENST00000480737 RBM42Q9BTD8 480 aaKnown RBP12.02□□□□□ -0.49
FN1-221ENST00000480737 OSCARQ8IYS5 282 aa11.86□□□□□ -0.51
FN1-221ENST00000480737 MKRN4PQ13434 485 aaPredicted RBP11.84□□□□□ -0.51
FN1-221ENST00000480737 FBLN2P98095 1184 aa11.83□□□□□ -0.52
FN1-221ENST00000480737 AKT1S1Q96B36 256 aa11.81□□□□□ -0.52
FN1-221ENST00000480737 SPDYE2BA6NHP3 402 aa11.74□□□□□ -0.53
FN1-221ENST00000480737 SPDYE6P0CI01 402 aa11.74□□□□□ -0.53
FN1-221ENST00000480737 SPDYE2Q495Y8 402 aa11.74□□□□□ -0.53
FN1-221ENST00000480737 POTEHQ6S545 545 aa11.67□□□□□ -0.54
FN1-221ENST00000480737 REM2Q8IYK8 340 aaPredicted RBP11.66□□□□□ -0.54
FN1-221ENST00000480737 SSUH2Q9Y2M2 353 aa11.65□□□□□ -0.54
FN1-221ENST00000480737 CHRDL2Q6WN34 429 aa11.63□□□□□ -0.55
FN1-221ENST00000480737 PITPNM1O00562 1244 aa11.54□□□□□ -0.56
FN1-221ENST00000480737 ZNF692Q9BU19 519 aaPredicted RBP11.54□□□□□ -0.56
FN1-221ENST00000480737 FXR2P51116 673 aaKnown RBP eCLIP11.44□□□□□ -0.58
FN1-221ENST00000480737 SPDYE1Q8NFV5 336 aaPredicted RBP11.44□□□□□ -0.58
FN1-221ENST00000480737 PIP4P2Q8N4L2 257 aa11.42□□□□□ -0.58
FN1-221ENST00000480737 PABPN1Q86U42 306 aaKnown RBP eCLIP11.4□□□□□ -0.58
FN1-221ENST00000480737 SPDYE4A6NLX3 237 aa11.34□□□□□ -0.59
FN1-221ENST00000480737 CLEC11AQ9Y240 323 aa11.29□□□□□ -0.6
FN1-221ENST00000480737 PROM2Q8N271 834 aa11.27□□□□□ -0.61
FN1-221ENST00000480737 PRR29P0C7W0 189 aa11.2□□□□□ -0.62
FN1-221ENST00000480737 PRKAR2AP13861 404 aaKnown RBP11.2□□□□□ -0.62
FN1-221ENST00000480737 STAG3Q9UJ98 1225 aa11.18□□□□□ -0.62
FN1-221ENST00000480737 CHADLQ6NUI6 762 aa11.1□□□□□ -0.63
FN1-221ENST00000480737 SP7Q8TDD2 431 aaPredicted RBP11.06□□□□□ -0.64
FN1-221ENST00000480737 C19orf67A6NJJ6 358 aa11.05□□□□□ -0.64
FN1-221ENST00000480737 HAX1O00165 279 aa11.05□□□□□ -0.64
FN1-221ENST00000480737 CREBZFQ9NS37 354 aa11.05□□□□□ -0.64
FN1-221ENST00000480737 EVX2Q03828 476 aa11.01□□□□□ -0.65
FN1-221ENST00000480737 FARP1Q9Y4F1 1045 aaPredicted RBP11.01□□□□□ -0.65
FN1-221ENST00000480737 FKBP8Q14318 412 aa10.99□□□□□ -0.65
FN1-221ENST00000480737 MNX1P50219 401 aaPredicted RBP10.95□□□□□ -0.66
FN1-221ENST00000480737 CD44P16070 742 aaKnown RBP10.86□□□□□ -0.67
FN1-221ENST00000480737 NPM1P06748 294 aaKnown RBP eCLIP10.81□□□□□ -0.68
FN1-221ENST00000480737 ZNF579Q8NAF0 562 aaKnown RBP10.79□□□□□ -0.68
FN1-221ENST00000480737 GABBR2O75899 941 aa10.78□□□□□ -0.68
FN1-221ENST00000480737 CLCN6P51797 869 aa10.78□□□□□ -0.68
FN1-221ENST00000480737 FBXO3Q9UK99 471 aa10.74□□□□□ -0.69
FN1-221ENST00000480737 MIER1Q8N108 512 aa10.73□□□□□ -0.69
FN1-221ENST00000480737 ZRANB1Q9UGI0 708 aa10.72□□□□□ -0.69
FN1-221ENST00000480737 PLEKHG5O94827 1062 aa10.71□□□□□ -0.69
FN1-221ENST00000480737 PAK3O75914 559 aaPredicted RBP10.68□□□□□ -0.7
FN1-221ENST00000480737 PLCD3Q8N3E9 789 aa10.68□□□□□ -0.7
FN1-221ENST00000480737 ZBTB47Q9UFB7 747 aaPredicted RBP10.66□□□□□ -0.7
FN1-221ENST00000480737 VASPP50552 380 aaPredicted RBP10.62□□□□□ -0.71
FN1-221ENST00000480737 CCDC61Q9Y6R9 512 aa10.62□□□□□ -0.71
FN1-221ENST00000480737 NUBP1P53384 320 aa10.61□□□□□ -0.71
FN1-221ENST00000480737 RASEFQ8IZ41 740 aa10.61□□□□□ -0.71
FN1-221ENST00000480737 PHF12Q96QT6 1004 aa10.61□□□□□ -0.71
FN1-221ENST00000480737 POTEIP0CG38 1075 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms