Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
CLCA3PQ9Y6N3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.12■■□□□ 1.45
CLCA3PQ9Y6N3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CLCA3PQ9Y6N3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
CLCA3PQ9Y6N3 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
CLCA3PQ9Y6N3 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CLCA3PQ9Y6N3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CLCA3PQ9Y6N3 AC139426.1-201ENST00000568218 2529 ntBASIC24.11■■□□□ 1.45
CLCA3PQ9Y6N3 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CLCA3PQ9Y6N3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.1■■□□□ 1.45
CLCA3PQ9Y6N3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
CLCA3PQ9Y6N3 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
CLCA3PQ9Y6N3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CLCA3PQ9Y6N3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CLCA3PQ9Y6N3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CLCA3PQ9Y6N3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CLCA3PQ9Y6N3 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CLCA3PQ9Y6N3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
CLCA3PQ9Y6N3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.07■■□□□ 1.44
CLCA3PQ9Y6N3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CLCA3PQ9Y6N3 AC135983.2-203ENST00000454486 1613 ntBASIC24.06■■□□□ 1.44
CLCA3PQ9Y6N3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
CLCA3PQ9Y6N3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CLCA3PQ9Y6N3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
CLCA3PQ9Y6N3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CLCA3PQ9Y6N3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.05■■□□□ 1.44
CLCA3PQ9Y6N3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CLCA3PQ9Y6N3 AL139393.2-201ENST00000608721 2025 ntBASIC24.05■■□□□ 1.44
CLCA3PQ9Y6N3 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CLCA3PQ9Y6N3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
CLCA3PQ9Y6N3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CLCA3PQ9Y6N3 DUX4L11-201ENST00000611504 1267 ntBASIC24.04■■□□□ 1.44
CLCA3PQ9Y6N3 DUX4L12-201ENST00000614593 1267 ntBASIC24.04■■□□□ 1.44
CLCA3PQ9Y6N3 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.04■■□□□ 1.44
CLCA3PQ9Y6N3 DUX4L14-201ENST00000621227 1267 ntBASIC24.04■■□□□ 1.44
CLCA3PQ9Y6N3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CLCA3PQ9Y6N3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CLCA3PQ9Y6N3 AP004833.2-201ENST00000532228 1454 ntBASIC24.03■■□□□ 1.44
CLCA3PQ9Y6N3 WHAMMP2-203ENST00000563942 1603 ntBASIC24.02■■□□□ 1.44
CLCA3PQ9Y6N3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.02■■□□□ 1.44
CLCA3PQ9Y6N3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
CLCA3PQ9Y6N3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
CLCA3PQ9Y6N3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
CLCA3PQ9Y6N3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.01■■□□□ 1.43
CLCA3PQ9Y6N3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.01■■□□□ 1.43
CLCA3PQ9Y6N3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CLCA3PQ9Y6N3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CLCA3PQ9Y6N3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CLCA3PQ9Y6N3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLCA3PQ9Y6N3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.98■■□□□ 1.43
CLCA3PQ9Y6N3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.98■■□□□ 1.43
CLCA3PQ9Y6N3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CLCA3PQ9Y6N3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CLCA3PQ9Y6N3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CLCA3PQ9Y6N3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.97■■□□□ 1.43
CLCA3PQ9Y6N3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
CLCA3PQ9Y6N3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.97■■□□□ 1.43
CLCA3PQ9Y6N3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.96■■□□□ 1.43
CLCA3PQ9Y6N3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
CLCA3PQ9Y6N3 DUX4L13-201ENST00000554103 1267 ntBASIC23.96■■□□□ 1.43
CLCA3PQ9Y6N3 DUX4L15-201ENST00000611059 1267 ntBASIC23.96■■□□□ 1.43
CLCA3PQ9Y6N3 DUX4L23-201ENST00000615195 1269 ntBASIC23.96■■□□□ 1.43
CLCA3PQ9Y6N3 DUX4L24-201ENST00000617576 1269 ntBASIC23.96■■□□□ 1.43
CLCA3PQ9Y6N3 DUX4L22-201ENST00000618238 1269 ntBASIC23.96■■□□□ 1.43
CLCA3PQ9Y6N3 DUX4L20-201ENST00000619712 1269 ntBASIC23.96■■□□□ 1.43
CLCA3PQ9Y6N3 DUX4L21-201ENST00000622058 1269 ntBASIC23.96■■□□□ 1.43
CLCA3PQ9Y6N3 DUX4L10-201ENST00000622460 1267 ntBASIC23.96■■□□□ 1.43
CLCA3PQ9Y6N3 DUX4L25-201ENST00000624915 1269 ntBASIC23.96■■□□□ 1.43
CLCA3PQ9Y6N3 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.96■■□□□ 1.43
CLCA3PQ9Y6N3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.96■■□□□ 1.43
CLCA3PQ9Y6N3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
CLCA3PQ9Y6N3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.43
CLCA3PQ9Y6N3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
CLCA3PQ9Y6N3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.94■■□□□ 1.42
CLCA3PQ9Y6N3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.94■■□□□ 1.42
CLCA3PQ9Y6N3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CLCA3PQ9Y6N3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.94■■□□□ 1.42
CLCA3PQ9Y6N3 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CLCA3PQ9Y6N3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CLCA3PQ9Y6N3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.93■■□□□ 1.42
CLCA3PQ9Y6N3 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
CLCA3PQ9Y6N3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CLCA3PQ9Y6N3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.93■■□□□ 1.42
CLCA3PQ9Y6N3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CLCA3PQ9Y6N3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CLCA3PQ9Y6N3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.92■■□□□ 1.42
CLCA3PQ9Y6N3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.92■■□□□ 1.42
CLCA3PQ9Y6N3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.92■■□□□ 1.42
CLCA3PQ9Y6N3 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.91■■□□□ 1.42
CLCA3PQ9Y6N3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
CLCA3PQ9Y6N3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.91■■□□□ 1.42
CLCA3PQ9Y6N3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CLCA3PQ9Y6N3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CLCA3PQ9Y6N3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
CLCA3PQ9Y6N3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
CLCA3PQ9Y6N3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.91■■□□□ 1.42
CLCA3PQ9Y6N3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.9■■□□□ 1.42
CLCA3PQ9Y6N3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
CLCA3PQ9Y6N3 MIR3648-2-201ENST00000581792 180 ntBASIC23.9■■□□□ 1.42
CLCA3PQ9Y6N3 MIR3648-1-201ENST00000615959 180 ntBASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms