Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC39.8■■■■□ 3.96
CDC42BPBQ9Y5S2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC39.8■■■■□ 3.96
CDC42BPBQ9Y5S2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC39.79■■■■□ 3.96
CDC42BPBQ9Y5S2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC39.79■■■■□ 3.96
CDC42BPBQ9Y5S2 AC022413.1-201ENST00000624602 984 ntBASIC39.79■■■■□ 3.96
CDC42BPBQ9Y5S2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC39.79■■■■□ 3.96
CDC42BPBQ9Y5S2 AC008813.1-201ENST00000536597 885 ntBASIC39.79■■■■□ 3.96
CDC42BPBQ9Y5S2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC39.78■■■■□ 3.96
CDC42BPBQ9Y5S2 AC148477.6-201ENST00000623746 465 ntBASIC39.78■■■■□ 3.96
CDC42BPBQ9Y5S2 AC060814.1-201ENST00000554326 538 ntBASIC39.77■■■■□ 3.96
CDC42BPBQ9Y5S2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC39.77■■■■□ 3.96
CDC42BPBQ9Y5S2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC39.77■■■■□ 3.96
CDC42BPBQ9Y5S2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC39.77■■■■□ 3.96
CDC42BPBQ9Y5S2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC39.75■■■■□ 3.95
CDC42BPBQ9Y5S2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC39.75■■■■□ 3.95
CDC42BPBQ9Y5S2 AC127502.1-201ENST00000399971 1502 ntBASIC39.75■■■■□ 3.95
CDC42BPBQ9Y5S2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC39.74■■■■□ 3.95
CDC42BPBQ9Y5S2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC39.74■■■■□ 3.95
CDC42BPBQ9Y5S2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC39.73■■■■□ 3.95
CDC42BPBQ9Y5S2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC39.73■■■■□ 3.95
CDC42BPBQ9Y5S2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC39.71■■■■□ 3.95
CDC42BPBQ9Y5S2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
CDC42BPBQ9Y5S2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC39.71■■■■□ 3.95
CDC42BPBQ9Y5S2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC39.71■■■■□ 3.95
CDC42BPBQ9Y5S2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC39.71■■■■□ 3.95
CDC42BPBQ9Y5S2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC39.71■■■■□ 3.95
CDC42BPBQ9Y5S2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC39.7■■■■□ 3.95
CDC42BPBQ9Y5S2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC39.7■■■■□ 3.95
CDC42BPBQ9Y5S2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC39.7■■■■□ 3.95
CDC42BPBQ9Y5S2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC39.69■■■■□ 3.94
CDC42BPBQ9Y5S2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC39.69■■■■□ 3.94
CDC42BPBQ9Y5S2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC39.69■■■■□ 3.94
CDC42BPBQ9Y5S2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC39.68■■■■□ 3.94
CDC42BPBQ9Y5S2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC39.68■■■■□ 3.94
CDC42BPBQ9Y5S2 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC39.68■■■■□ 3.94
CDC42BPBQ9Y5S2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC39.67■■■■□ 3.94
CDC42BPBQ9Y5S2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC39.66■■■■□ 3.94
CDC42BPBQ9Y5S2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC39.66■■■■□ 3.94
CDC42BPBQ9Y5S2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC39.65■■■■□ 3.94
CDC42BPBQ9Y5S2 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
CDC42BPBQ9Y5S2 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
CDC42BPBQ9Y5S2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC39.64■■■■□ 3.94
CDC42BPBQ9Y5S2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC39.64■■■■□ 3.94
CDC42BPBQ9Y5S2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC39.62■■■■□ 3.93
CDC42BPBQ9Y5S2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC39.62■■■■□ 3.93
CDC42BPBQ9Y5S2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC39.61■■■■□ 3.93
CDC42BPBQ9Y5S2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC39.61■■■■□ 3.93
CDC42BPBQ9Y5S2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC39.61■■■■□ 3.93
CDC42BPBQ9Y5S2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC39.6■■■■□ 3.93
CDC42BPBQ9Y5S2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC39.6■■■■□ 3.93
CDC42BPBQ9Y5S2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC39.6■■■■□ 3.93
CDC42BPBQ9Y5S2 AC092296.2-201ENST00000589470 999 ntBASIC39.6■■■■□ 3.93
CDC42BPBQ9Y5S2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC39.57■■■■□ 3.92
CDC42BPBQ9Y5S2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC39.57■■■■□ 3.92
CDC42BPBQ9Y5S2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC39.57■■■■□ 3.92
CDC42BPBQ9Y5S2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC39.57■■■■□ 3.92
CDC42BPBQ9Y5S2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC39.56■■■■□ 3.92
CDC42BPBQ9Y5S2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC39.56■■■■□ 3.92
CDC42BPBQ9Y5S2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC39.56■■■■□ 3.92
CDC42BPBQ9Y5S2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC39.55■■■■□ 3.92
CDC42BPBQ9Y5S2 AC018358.1-201ENST00000631079 1402 ntBASIC39.54■■■■□ 3.92
CDC42BPBQ9Y5S2 GFER-205ENST00000569451 517 ntTSL 5 BASIC39.54■■■■□ 3.92
CDC42BPBQ9Y5S2 U85056.1-201ENST00000616429 682 ntBASIC39.54■■■■□ 3.92
CDC42BPBQ9Y5S2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC39.53■■■■□ 3.92
CDC42BPBQ9Y5S2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC39.53■■■■□ 3.92
CDC42BPBQ9Y5S2 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC39.53■■■■□ 3.92
CDC42BPBQ9Y5S2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC39.52■■■■□ 3.92
CDC42BPBQ9Y5S2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC39.52■■■■□ 3.92
CDC42BPBQ9Y5S2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC39.52■■■■□ 3.92
CDC42BPBQ9Y5S2 AC110285.7-201ENST00000624417 1536 ntBASIC39.51■■■■□ 3.92
CDC42BPBQ9Y5S2 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC39.51■■■■□ 3.91
CDC42BPBQ9Y5S2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC39.5■■■■□ 3.91
CDC42BPBQ9Y5S2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC39.5■■■■□ 3.91
CDC42BPBQ9Y5S2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC39.5■■■■□ 3.91
CDC42BPBQ9Y5S2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC39.5■■■■□ 3.91
CDC42BPBQ9Y5S2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC39.5■■■■□ 3.91
CDC42BPBQ9Y5S2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC39.49■■■■□ 3.91
CDC42BPBQ9Y5S2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC39.49■■■■□ 3.91
CDC42BPBQ9Y5S2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC39.48■■■■□ 3.91
CDC42BPBQ9Y5S2 KRT18P60-201ENST00000312876 1297 ntBASIC39.46■■■■□ 3.91
CDC42BPBQ9Y5S2 AL033527.3-201ENST00000566366 1196 ntBASIC39.46■■■■□ 3.91
CDC42BPBQ9Y5S2 AL135925.1-201ENST00000605920 1701 ntBASIC39.46■■■■□ 3.91
CDC42BPBQ9Y5S2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC39.45■■■■□ 3.91
CDC42BPBQ9Y5S2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC39.45■■■■□ 3.91
CDC42BPBQ9Y5S2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC39.45■■■■□ 3.91
CDC42BPBQ9Y5S2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC39.45■■■■□ 3.91
CDC42BPBQ9Y5S2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC39.45■■■■□ 3.91
CDC42BPBQ9Y5S2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC39.44■■■■□ 3.9
CDC42BPBQ9Y5S2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC39.44■■■■□ 3.9
CDC42BPBQ9Y5S2 MIR219A2-201ENST00000608502 1504 ntBASIC39.44■■■■□ 3.9
CDC42BPBQ9Y5S2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC39.44■■■■□ 3.9
CDC42BPBQ9Y5S2 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC39.43■■■■□ 3.9
CDC42BPBQ9Y5S2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC39.43■■■■□ 3.9
CDC42BPBQ9Y5S2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC39.41■■■■□ 3.9
CDC42BPBQ9Y5S2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC39.41■■■■□ 3.9
CDC42BPBQ9Y5S2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC39.4■■■■□ 3.9
CDC42BPBQ9Y5S2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC39.39■■■■□ 3.9
CDC42BPBQ9Y5S2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC39.39■■■■□ 3.9
CDC42BPBQ9Y5S2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC39.38■■■■□ 3.9
CDC42BPBQ9Y5S2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC39.38■■■■□ 3.9
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms