Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.09■■■□□ 2.57
PCDHAC2Q9Y5I4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC31.08■■■□□ 2.57
PCDHAC2Q9Y5I4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
PCDHAC2Q9Y5I4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC31.08■■■□□ 2.57
PCDHAC2Q9Y5I4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC31.08■■■□□ 2.57
PCDHAC2Q9Y5I4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
PCDHAC2Q9Y5I4 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
PCDHAC2Q9Y5I4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
PCDHAC2Q9Y5I4 AC022413.1-201ENST00000624602 984 ntBASIC31.06■■■□□ 2.56
PCDHAC2Q9Y5I4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
PCDHAC2Q9Y5I4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC31.05■■■□□ 2.56
PCDHAC2Q9Y5I4 AL135925.1-201ENST00000605920 1701 ntBASIC31.05■■■□□ 2.56
PCDHAC2Q9Y5I4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
PCDHAC2Q9Y5I4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC31.05■■■□□ 2.56
PCDHAC2Q9Y5I4 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
PCDHAC2Q9Y5I4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC31.03■■■□□ 2.56
PCDHAC2Q9Y5I4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC31.02■■■□□ 2.56
PCDHAC2Q9Y5I4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC31.02■■■□□ 2.56
PCDHAC2Q9Y5I4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC31.01■■■□□ 2.55
PCDHAC2Q9Y5I4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
PCDHAC2Q9Y5I4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
PCDHAC2Q9Y5I4 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
PCDHAC2Q9Y5I4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
PCDHAC2Q9Y5I4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
PCDHAC2Q9Y5I4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
PCDHAC2Q9Y5I4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
PCDHAC2Q9Y5I4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
PCDHAC2Q9Y5I4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.98■■■□□ 2.55
PCDHAC2Q9Y5I4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
PCDHAC2Q9Y5I4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
PCDHAC2Q9Y5I4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
PCDHAC2Q9Y5I4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
PCDHAC2Q9Y5I4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
PCDHAC2Q9Y5I4 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
PCDHAC2Q9Y5I4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC30.96■■■□□ 2.55
PCDHAC2Q9Y5I4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
PCDHAC2Q9Y5I4 AC110285.7-201ENST00000624417 1536 ntBASIC30.95■■■□□ 2.55
PCDHAC2Q9Y5I4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
PCDHAC2Q9Y5I4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
PCDHAC2Q9Y5I4 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.95■■■□□ 2.55
PCDHAC2Q9Y5I4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC30.95■■■□□ 2.54
PCDHAC2Q9Y5I4 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
PCDHAC2Q9Y5I4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.94■■■□□ 2.54
PCDHAC2Q9Y5I4 AC008813.1-201ENST00000536597 885 ntBASIC30.94■■■□□ 2.54
PCDHAC2Q9Y5I4 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.94■■■□□ 2.54
PCDHAC2Q9Y5I4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
PCDHAC2Q9Y5I4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
PCDHAC2Q9Y5I4 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC30.93■■■□□ 2.54
PCDHAC2Q9Y5I4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.92■■■□□ 2.54
PCDHAC2Q9Y5I4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.92■■■□□ 2.54
PCDHAC2Q9Y5I4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
PCDHAC2Q9Y5I4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC30.91■■■□□ 2.54
PCDHAC2Q9Y5I4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
PCDHAC2Q9Y5I4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC30.91■■■□□ 2.54
PCDHAC2Q9Y5I4 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
PCDHAC2Q9Y5I4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.9■■■□□ 2.54
PCDHAC2Q9Y5I4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
PCDHAC2Q9Y5I4 NTF6A-201ENST00000591175 560 ntBASIC30.89■■■□□ 2.54
PCDHAC2Q9Y5I4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
PCDHAC2Q9Y5I4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
PCDHAC2Q9Y5I4 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.88■■■□□ 2.53
PCDHAC2Q9Y5I4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.88■■■□□ 2.53
PCDHAC2Q9Y5I4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
PCDHAC2Q9Y5I4 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.87■■■□□ 2.53
PCDHAC2Q9Y5I4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.87■■■□□ 2.53
PCDHAC2Q9Y5I4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
PCDHAC2Q9Y5I4 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
PCDHAC2Q9Y5I4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PCDHAC2Q9Y5I4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.83■■■□□ 2.53
PCDHAC2Q9Y5I4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
PCDHAC2Q9Y5I4 AC060814.1-201ENST00000554326 538 ntBASIC30.83■■■□□ 2.53
PCDHAC2Q9Y5I4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.82■■■□□ 2.52
PCDHAC2Q9Y5I4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
PCDHAC2Q9Y5I4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
PCDHAC2Q9Y5I4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
PCDHAC2Q9Y5I4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC30.81■■■□□ 2.52
PCDHAC2Q9Y5I4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
PCDHAC2Q9Y5I4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
PCDHAC2Q9Y5I4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC30.79■■■□□ 2.52
PCDHAC2Q9Y5I4 AC148477.6-201ENST00000623746 465 ntBASIC30.79■■■□□ 2.52
PCDHAC2Q9Y5I4 U85056.1-201ENST00000616429 682 ntBASIC30.78■■■□□ 2.52
PCDHAC2Q9Y5I4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.78■■■□□ 2.52
PCDHAC2Q9Y5I4 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
PCDHAC2Q9Y5I4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC30.78■■■□□ 2.52
PCDHAC2Q9Y5I4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
PCDHAC2Q9Y5I4 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PCDHAC2Q9Y5I4 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC30.77■■■□□ 2.52
PCDHAC2Q9Y5I4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
PCDHAC2Q9Y5I4 AC012354.3-201ENST00000623734 483 ntBASIC30.77■■■□□ 2.52
PCDHAC2Q9Y5I4 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
PCDHAC2Q9Y5I4 MIR219A2-201ENST00000608502 1504 ntBASIC30.77■■■□□ 2.52
PCDHAC2Q9Y5I4 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
PCDHAC2Q9Y5I4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC30.76■■■□□ 2.52
PCDHAC2Q9Y5I4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC30.76■■■□□ 2.51
PCDHAC2Q9Y5I4 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
PCDHAC2Q9Y5I4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
PCDHAC2Q9Y5I4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
PCDHAC2Q9Y5I4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
PCDHAC2Q9Y5I4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC30.74■■■□□ 2.51
PCDHAC2Q9Y5I4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC30.74■■■□□ 2.51
Retrieved 100 of 98,524 protein–RNA pairs in 139.6 ms