Protein–RNA interactions for Protein: Q9HCI7

MSL2, E3 ubiquitin-protein ligase MSL2, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSL2Q9HCI7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
MSL2Q9HCI7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
MSL2Q9HCI7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.97■■□□□ 1.11
MSL2Q9HCI7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.97■■□□□ 1.11
MSL2Q9HCI7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC21.97■■□□□ 1.11
MSL2Q9HCI7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC21.97■■□□□ 1.11
MSL2Q9HCI7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.97■■□□□ 1.11
MSL2Q9HCI7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
MSL2Q9HCI7 LINC01971-201ENST00000617888 1048 ntBASIC21.96■■□□□ 1.11
MSL2Q9HCI7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
MSL2Q9HCI7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
MSL2Q9HCI7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MSL2Q9HCI7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC21.95■■□□□ 1.1
MSL2Q9HCI7 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.95■■□□□ 1.1
MSL2Q9HCI7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
MSL2Q9HCI7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
MSL2Q9HCI7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC21.94■■□□□ 1.1
MSL2Q9HCI7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
MSL2Q9HCI7 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.94■■□□□ 1.1
MSL2Q9HCI7 AP004833.2-201ENST00000532228 1454 ntBASIC21.93■■□□□ 1.1
MSL2Q9HCI7 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
MSL2Q9HCI7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MSL2Q9HCI7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MSL2Q9HCI7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
MSL2Q9HCI7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
MSL2Q9HCI7 DUX4L11-201ENST00000611504 1267 ntBASIC21.92■■□□□ 1.1
MSL2Q9HCI7 DUX4L12-201ENST00000614593 1267 ntBASIC21.92■■□□□ 1.1
MSL2Q9HCI7 DUX4L14-201ENST00000621227 1267 ntBASIC21.92■■□□□ 1.1
MSL2Q9HCI7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.92■■□□□ 1.1
MSL2Q9HCI7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
MSL2Q9HCI7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
MSL2Q9HCI7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
MSL2Q9HCI7 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
MSL2Q9HCI7 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
MSL2Q9HCI7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
MSL2Q9HCI7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
MSL2Q9HCI7 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.89■■□□□ 1.1
MSL2Q9HCI7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.89■■□□□ 1.1
MSL2Q9HCI7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.89■■□□□ 1.09
MSL2Q9HCI7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.89■■□□□ 1.09
MSL2Q9HCI7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MSL2Q9HCI7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
MSL2Q9HCI7 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MSL2Q9HCI7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
MSL2Q9HCI7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
MSL2Q9HCI7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.89■■□□□ 1.09
MSL2Q9HCI7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
MSL2Q9HCI7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MSL2Q9HCI7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.88■■□□□ 1.09
MSL2Q9HCI7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
MSL2Q9HCI7 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
MSL2Q9HCI7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.88■■□□□ 1.09
MSL2Q9HCI7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC21.88■■□□□ 1.09
MSL2Q9HCI7 AC100797.4-201ENST00000631653 1827 ntBASIC21.87■■□□□ 1.09
MSL2Q9HCI7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
MSL2Q9HCI7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.87■■□□□ 1.09
MSL2Q9HCI7 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
MSL2Q9HCI7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.87■■□□□ 1.09
MSL2Q9HCI7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.87■■□□□ 1.09
MSL2Q9HCI7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.86■■□□□ 1.09
MSL2Q9HCI7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
MSL2Q9HCI7 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
MSL2Q9HCI7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
MSL2Q9HCI7 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
MSL2Q9HCI7 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.85■■□□□ 1.09
MSL2Q9HCI7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.85■■□□□ 1.09
MSL2Q9HCI7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MSL2Q9HCI7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.84■■□□□ 1.09
MSL2Q9HCI7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
MSL2Q9HCI7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
MSL2Q9HCI7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.83■■□□□ 1.09
MSL2Q9HCI7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.83■■□□□ 1.09
MSL2Q9HCI7 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MSL2Q9HCI7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
MSL2Q9HCI7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MSL2Q9HCI7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
MSL2Q9HCI7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.83■■□□□ 1.09
MSL2Q9HCI7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.83■■□□□ 1.09
MSL2Q9HCI7 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
MSL2Q9HCI7 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
MSL2Q9HCI7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
MSL2Q9HCI7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.82■■□□□ 1.08
MSL2Q9HCI7 DUX4L13-201ENST00000554103 1267 ntBASIC21.82■■□□□ 1.08
MSL2Q9HCI7 DUX4L15-201ENST00000611059 1267 ntBASIC21.82■■□□□ 1.08
MSL2Q9HCI7 DUX4L23-201ENST00000615195 1269 ntBASIC21.82■■□□□ 1.08
MSL2Q9HCI7 DUX4L24-201ENST00000617576 1269 ntBASIC21.82■■□□□ 1.08
MSL2Q9HCI7 DUX4L22-201ENST00000618238 1269 ntBASIC21.82■■□□□ 1.08
MSL2Q9HCI7 DUX4L20-201ENST00000619712 1269 ntBASIC21.82■■□□□ 1.08
MSL2Q9HCI7 DUX4L21-201ENST00000622058 1269 ntBASIC21.82■■□□□ 1.08
MSL2Q9HCI7 DUX4L10-201ENST00000622460 1267 ntBASIC21.82■■□□□ 1.08
MSL2Q9HCI7 DUX4L25-201ENST00000624915 1269 ntBASIC21.82■■□□□ 1.08
MSL2Q9HCI7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
MSL2Q9HCI7 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
MSL2Q9HCI7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
MSL2Q9HCI7 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MSL2Q9HCI7 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
MSL2Q9HCI7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.8■■□□□ 1.08
MSL2Q9HCI7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
MSL2Q9HCI7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.79■■□□□ 1.08
MSL2Q9HCI7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 172.8 ms