Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.81■■□□□ 1.24
SEC61A2Q9H9S3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
SEC61A2Q9H9S3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.8■■□□□ 1.24
SEC61A2Q9H9S3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.8■■□□□ 1.24
SEC61A2Q9H9S3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.8■■□□□ 1.24
SEC61A2Q9H9S3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
SEC61A2Q9H9S3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.8■■□□□ 1.24
SEC61A2Q9H9S3 AP004833.2-201ENST00000532228 1454 ntBASIC22.79■■□□□ 1.24
SEC61A2Q9H9S3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
SEC61A2Q9H9S3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SEC61A2Q9H9S3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
SEC61A2Q9H9S3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
SEC61A2Q9H9S3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
SEC61A2Q9H9S3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.78■■□□□ 1.24
SEC61A2Q9H9S3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
SEC61A2Q9H9S3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SEC61A2Q9H9S3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SEC61A2Q9H9S3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.77■■□□□ 1.24
SEC61A2Q9H9S3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
SEC61A2Q9H9S3 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SEC61A2Q9H9S3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22.77■■□□□ 1.24
SEC61A2Q9H9S3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
SEC61A2Q9H9S3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.76■■□□□ 1.23
SEC61A2Q9H9S3 DRD5P2-201ENST00000421395 2012 ntBASIC22.76■■□□□ 1.23
SEC61A2Q9H9S3 AC021231.2-201ENST00000594613 730 ntBASIC22.76■■□□□ 1.23
SEC61A2Q9H9S3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SEC61A2Q9H9S3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SEC61A2Q9H9S3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.75■■□□□ 1.23
SEC61A2Q9H9S3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22.75■■□□□ 1.23
SEC61A2Q9H9S3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.75■■□□□ 1.23
SEC61A2Q9H9S3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22.75■■□□□ 1.23
SEC61A2Q9H9S3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC22.74■■□□□ 1.23
SEC61A2Q9H9S3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.74■■□□□ 1.23
SEC61A2Q9H9S3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
SEC61A2Q9H9S3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC22.74■■□□□ 1.23
SEC61A2Q9H9S3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.74■■□□□ 1.23
SEC61A2Q9H9S3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SEC61A2Q9H9S3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SEC61A2Q9H9S3 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SEC61A2Q9H9S3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SEC61A2Q9H9S3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SEC61A2Q9H9S3 ABHD17AP4-201ENST00000411545 909 ntBASIC22.73■■□□□ 1.23
SEC61A2Q9H9S3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22.73■■□□□ 1.23
SEC61A2Q9H9S3 AC142086.6-201ENST00000621154 1765 ntBASIC22.73■■□□□ 1.23
SEC61A2Q9H9S3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.73■■□□□ 1.23
SEC61A2Q9H9S3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
SEC61A2Q9H9S3 DUX4L29-201ENST00000425409 679 ntBASIC22.72■■□□□ 1.23
SEC61A2Q9H9S3 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SEC61A2Q9H9S3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
SEC61A2Q9H9S3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC22.71■■□□□ 1.23
SEC61A2Q9H9S3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SEC61A2Q9H9S3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.71■■□□□ 1.23
SEC61A2Q9H9S3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SEC61A2Q9H9S3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.71■■□□□ 1.23
SEC61A2Q9H9S3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.71■■□□□ 1.23
SEC61A2Q9H9S3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SEC61A2Q9H9S3 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.23
SEC61A2Q9H9S3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
SEC61A2Q9H9S3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SEC61A2Q9H9S3 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.69■■□□□ 1.22
SEC61A2Q9H9S3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SEC61A2Q9H9S3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SEC61A2Q9H9S3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SEC61A2Q9H9S3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SEC61A2Q9H9S3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
SEC61A2Q9H9S3 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
SEC61A2Q9H9S3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SEC61A2Q9H9S3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SEC61A2Q9H9S3 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
SEC61A2Q9H9S3 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
SEC61A2Q9H9S3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
SEC61A2Q9H9S3 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.67■■□□□ 1.22
SEC61A2Q9H9S3 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
SEC61A2Q9H9S3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SEC61A2Q9H9S3 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SEC61A2Q9H9S3 AC100797.4-201ENST00000631653 1827 ntBASIC22.66■■□□□ 1.22
SEC61A2Q9H9S3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
SEC61A2Q9H9S3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
SEC61A2Q9H9S3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.66■■□□□ 1.22
SEC61A2Q9H9S3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
SEC61A2Q9H9S3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.65■■□□□ 1.22
SEC61A2Q9H9S3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SEC61A2Q9H9S3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
SEC61A2Q9H9S3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
SEC61A2Q9H9S3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC22.65■■□□□ 1.22
SEC61A2Q9H9S3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
SEC61A2Q9H9S3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.22
SEC61A2Q9H9S3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
SEC61A2Q9H9S3 ZNRF2P2-203ENST00000454624 420 ntBASIC22.64■■□□□ 1.21
SEC61A2Q9H9S3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.21
SEC61A2Q9H9S3 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SEC61A2Q9H9S3 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SEC61A2Q9H9S3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
SEC61A2Q9H9S3 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
SEC61A2Q9H9S3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SEC61A2Q9H9S3 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SEC61A2Q9H9S3 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC22.62■■□□□ 1.21
SEC61A2Q9H9S3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SEC61A2Q9H9S3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.62■■□□□ 1.21
SEC61A2Q9H9S3 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 335.4 ms