Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
BRD9Q9H8M2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.75■■□□□ 1.87
BRD9Q9H8M2 AC022413.1-201ENST00000624602 984 ntBASIC26.74■■□□□ 1.87
BRD9Q9H8M2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
BRD9Q9H8M2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
BRD9Q9H8M2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
BRD9Q9H8M2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.73■■□□□ 1.87
BRD9Q9H8M2 AC008813.1-201ENST00000536597 885 ntBASIC26.72■■□□□ 1.87
BRD9Q9H8M2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
BRD9Q9H8M2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
BRD9Q9H8M2 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
BRD9Q9H8M2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
BRD9Q9H8M2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.71■■□□□ 1.87
BRD9Q9H8M2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.71■■□□□ 1.87
BRD9Q9H8M2 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
BRD9Q9H8M2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
BRD9Q9H8M2 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.7■■□□□ 1.86
BRD9Q9H8M2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
BRD9Q9H8M2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
BRD9Q9H8M2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
BRD9Q9H8M2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.68■■□□□ 1.86
BRD9Q9H8M2 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
BRD9Q9H8M2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
BRD9Q9H8M2 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
BRD9Q9H8M2 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
BRD9Q9H8M2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
BRD9Q9H8M2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
BRD9Q9H8M2 AC127502.1-201ENST00000399971 1502 ntBASIC26.66■■□□□ 1.86
BRD9Q9H8M2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
BRD9Q9H8M2 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.66■■□□□ 1.86
BRD9Q9H8M2 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
BRD9Q9H8M2 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
BRD9Q9H8M2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC26.65■■□□□ 1.86
BRD9Q9H8M2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
BRD9Q9H8M2 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
BRD9Q9H8M2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.64■■□□□ 1.85
BRD9Q9H8M2 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.63■■□□□ 1.85
BRD9Q9H8M2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
BRD9Q9H8M2 AC135983.2-203ENST00000454486 1613 ntBASIC26.61■■□□□ 1.85
BRD9Q9H8M2 WHAMMP2-203ENST00000563942 1603 ntBASIC26.61■■□□□ 1.85
BRD9Q9H8M2 NTF6A-201ENST00000591175 560 ntBASIC26.61■■□□□ 1.85
BRD9Q9H8M2 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
BRD9Q9H8M2 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.61■■□□□ 1.85
BRD9Q9H8M2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
BRD9Q9H8M2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
BRD9Q9H8M2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
BRD9Q9H8M2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.6■■□□□ 1.85
BRD9Q9H8M2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
BRD9Q9H8M2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
BRD9Q9H8M2 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
BRD9Q9H8M2 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.59■■□□□ 1.85
BRD9Q9H8M2 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
BRD9Q9H8M2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
BRD9Q9H8M2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
BRD9Q9H8M2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.58■■□□□ 1.84
BRD9Q9H8M2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.57■■□□□ 1.84
BRD9Q9H8M2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.57■■□□□ 1.84
BRD9Q9H8M2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.57■■□□□ 1.84
BRD9Q9H8M2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
BRD9Q9H8M2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.56■■□□□ 1.84
BRD9Q9H8M2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.56■■□□□ 1.84
BRD9Q9H8M2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
BRD9Q9H8M2 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
BRD9Q9H8M2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
BRD9Q9H8M2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
BRD9Q9H8M2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
BRD9Q9H8M2 AC012354.3-201ENST00000623734 483 ntBASIC26.55■■□□□ 1.84
BRD9Q9H8M2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
BRD9Q9H8M2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
BRD9Q9H8M2 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
BRD9Q9H8M2 AC110285.7-201ENST00000624417 1536 ntBASIC26.53■■□□□ 1.84
BRD9Q9H8M2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
BRD9Q9H8M2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.52■■□□□ 1.84
BRD9Q9H8M2 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
BRD9Q9H8M2 ST7-205ENST00000393446 2114 ntTSL 5 BASIC26.51■■□□□ 1.84
BRD9Q9H8M2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.84
BRD9Q9H8M2 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
BRD9Q9H8M2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
BRD9Q9H8M2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
BRD9Q9H8M2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
BRD9Q9H8M2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
BRD9Q9H8M2 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
BRD9Q9H8M2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
BRD9Q9H8M2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
BRD9Q9H8M2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.48■■□□□ 1.83
BRD9Q9H8M2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
BRD9Q9H8M2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
BRD9Q9H8M2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
BRD9Q9H8M2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
BRD9Q9H8M2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.47■■□□□ 1.83
BRD9Q9H8M2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
BRD9Q9H8M2 AL135925.1-201ENST00000605920 1701 ntBASIC26.46■■□□□ 1.83
BRD9Q9H8M2 AC148477.6-201ENST00000623746 465 ntBASIC26.46■■□□□ 1.83
BRD9Q9H8M2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
BRD9Q9H8M2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.44■■□□□ 1.82
BRD9Q9H8M2 AC060814.1-201ENST00000554326 538 ntBASIC26.44■■□□□ 1.82
BRD9Q9H8M2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
BRD9Q9H8M2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.44■■□□□ 1.82
BRD9Q9H8M2 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
BRD9Q9H8M2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms