Protein–RNA interactions for Protein: Q9H492

MAP1LC3A, Microtubule-associated proteins 1A/1B light chain 3A, humanhuman

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3AQ9H492 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
MAP1LC3AQ9H492 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MAP1LC3AQ9H492 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.64■□□□□ 0.57
MAP1LC3AQ9H492 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
MAP1LC3AQ9H492 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
MAP1LC3AQ9H492 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MAP1LC3AQ9H492 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.63■□□□□ 0.57
MAP1LC3AQ9H492 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MAP1LC3AQ9H492 PROC-203ENST00000409048 1586 ntTSL 5 BASIC18.63■□□□□ 0.57
MAP1LC3AQ9H492 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
MAP1LC3AQ9H492 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MAP1LC3AQ9H492 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MAP1LC3AQ9H492 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MAP1LC3AQ9H492 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MAP1LC3AQ9H492 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.62■□□□□ 0.57
MAP1LC3AQ9H492 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
MAP1LC3AQ9H492 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
MAP1LC3AQ9H492 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MAP1LC3AQ9H492 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC18.61■□□□□ 0.57
MAP1LC3AQ9H492 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC18.61■□□□□ 0.57
MAP1LC3AQ9H492 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MAP1LC3AQ9H492 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
MAP1LC3AQ9H492 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.6■□□□□ 0.57
MAP1LC3AQ9H492 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
MAP1LC3AQ9H492 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
MAP1LC3AQ9H492 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC18.6■□□□□ 0.57
MAP1LC3AQ9H492 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MAP1LC3AQ9H492 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
MAP1LC3AQ9H492 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MAP1LC3AQ9H492 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MAP1LC3AQ9H492 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MAP1LC3AQ9H492 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MAP1LC3AQ9H492 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MAP1LC3AQ9H492 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.58■□□□□ 0.56
MAP1LC3AQ9H492 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC18.58■□□□□ 0.56
MAP1LC3AQ9H492 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC18.58■□□□□ 0.56
MAP1LC3AQ9H492 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
MAP1LC3AQ9H492 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
MAP1LC3AQ9H492 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC18.57■□□□□ 0.56
MAP1LC3AQ9H492 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC18.57■□□□□ 0.56
MAP1LC3AQ9H492 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC18.57■□□□□ 0.56
MAP1LC3AQ9H492 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
MAP1LC3AQ9H492 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MAP1LC3AQ9H492 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
MAP1LC3AQ9H492 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
MAP1LC3AQ9H492 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
MAP1LC3AQ9H492 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MAP1LC3AQ9H492 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MAP1LC3AQ9H492 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC18.55■□□□□ 0.56
MAP1LC3AQ9H492 EBPL-203ENST00000378270 579 ntTSL 2 BASIC18.55■□□□□ 0.56
MAP1LC3AQ9H492 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MAP1LC3AQ9H492 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MAP1LC3AQ9H492 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
MAP1LC3AQ9H492 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MAP1LC3AQ9H492 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MAP1LC3AQ9H492 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MAP1LC3AQ9H492 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC18.54■□□□□ 0.56
MAP1LC3AQ9H492 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MAP1LC3AQ9H492 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MAP1LC3AQ9H492 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
MAP1LC3AQ9H492 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
MAP1LC3AQ9H492 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
MAP1LC3AQ9H492 LINC01003-201ENST00000564834 1764 ntBASIC18.53■□□□□ 0.56
MAP1LC3AQ9H492 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC18.53■□□□□ 0.56
MAP1LC3AQ9H492 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MAP1LC3AQ9H492 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.52■□□□□ 0.56
MAP1LC3AQ9H492 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MAP1LC3AQ9H492 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MAP1LC3AQ9H492 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MAP1LC3AQ9H492 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MAP1LC3AQ9H492 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MAP1LC3AQ9H492 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MAP1LC3AQ9H492 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MAP1LC3AQ9H492 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MAP1LC3AQ9H492 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.51■□□□□ 0.55
MAP1LC3AQ9H492 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MAP1LC3AQ9H492 AC010864.1-201ENST00000609407 1511 ntBASIC18.5■□□□□ 0.55
MAP1LC3AQ9H492 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MAP1LC3AQ9H492 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.49■□□□□ 0.55
MAP1LC3AQ9H492 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MAP1LC3AQ9H492 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
MAP1LC3AQ9H492 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MAP1LC3AQ9H492 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
MAP1LC3AQ9H492 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MAP1LC3AQ9H492 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MAP1LC3AQ9H492 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
MAP1LC3AQ9H492 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.48■□□□□ 0.55
MAP1LC3AQ9H492 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MAP1LC3AQ9H492 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
MAP1LC3AQ9H492 AP004833.2-201ENST00000532228 1454 ntBASIC18.47■□□□□ 0.55
MAP1LC3AQ9H492 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MAP1LC3AQ9H492 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC18.47■□□□□ 0.55
MAP1LC3AQ9H492 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
MAP1LC3AQ9H492 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC18.47■□□□□ 0.55
MAP1LC3AQ9H492 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MAP1LC3AQ9H492 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
MAP1LC3AQ9H492 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MAP1LC3AQ9H492 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
MAP1LC3AQ9H492 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
MAP1LC3AQ9H492 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms