Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC29.55■■■□□ 2.32
USP6NLQ92738 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC29.55■■■□□ 2.32
USP6NLQ92738 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
USP6NLQ92738 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC29.54■■■□□ 2.32
USP6NLQ92738 AC135983.2-203ENST00000454486 1613 ntBASIC29.53■■■□□ 2.32
USP6NLQ92738 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
USP6NLQ92738 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
USP6NLQ92738 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
USP6NLQ92738 WHAMMP2-203ENST00000563942 1603 ntBASIC29.52■■■□□ 2.32
USP6NLQ92738 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
USP6NLQ92738 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC29.51■■■□□ 2.31
USP6NLQ92738 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC29.51■■■□□ 2.31
USP6NLQ92738 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC29.51■■■□□ 2.31
USP6NLQ92738 AC127502.1-201ENST00000399971 1502 ntBASIC29.5■■■□□ 2.31
USP6NLQ92738 CHST11-203ENST00000547956 936 ntTSL 2 BASIC29.5■■■□□ 2.31
USP6NLQ92738 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
USP6NLQ92738 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC29.48■■■□□ 2.31
USP6NLQ92738 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
USP6NLQ92738 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC29.46■■■□□ 2.31
USP6NLQ92738 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
USP6NLQ92738 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
USP6NLQ92738 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
USP6NLQ92738 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
USP6NLQ92738 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
USP6NLQ92738 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC29.44■■■□□ 2.3
USP6NLQ92738 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
USP6NLQ92738 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC29.43■■■□□ 2.3
USP6NLQ92738 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
USP6NLQ92738 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC29.42■■■□□ 2.3
USP6NLQ92738 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC29.42■■■□□ 2.3
USP6NLQ92738 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
USP6NLQ92738 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
USP6NLQ92738 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC29.42■■■□□ 2.3
USP6NLQ92738 AC060814.1-201ENST00000554326 538 ntBASIC29.42■■■□□ 2.3
USP6NLQ92738 AC148477.6-201ENST00000623746 465 ntBASIC29.42■■■□□ 2.3
USP6NLQ92738 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC29.42■■■□□ 2.3
USP6NLQ92738 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC29.41■■■□□ 2.3
USP6NLQ92738 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
USP6NLQ92738 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
USP6NLQ92738 U85056.1-201ENST00000616429 682 ntBASIC29.41■■■□□ 2.3
USP6NLQ92738 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC29.4■■■□□ 2.3
USP6NLQ92738 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC29.4■■■□□ 2.3
USP6NLQ92738 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
USP6NLQ92738 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
USP6NLQ92738 AC018358.1-201ENST00000631079 1402 ntBASIC29.38■■■□□ 2.29
USP6NLQ92738 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC29.38■■■□□ 2.29
USP6NLQ92738 AC110285.7-201ENST00000624417 1536 ntBASIC29.37■■■□□ 2.29
USP6NLQ92738 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
USP6NLQ92738 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
USP6NLQ92738 AL033527.3-201ENST00000566366 1196 ntBASIC29.37■■■□□ 2.29
USP6NLQ92738 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
USP6NLQ92738 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC29.35■■■□□ 2.29
USP6NLQ92738 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC29.35■■■□□ 2.29
USP6NLQ92738 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC29.35■■■□□ 2.29
USP6NLQ92738 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
USP6NLQ92738 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
USP6NLQ92738 HYI-213ENST00000583037 1322 ntTSL 5 BASIC29.35■■■□□ 2.29
USP6NLQ92738 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC29.34■■■□□ 2.29
USP6NLQ92738 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
USP6NLQ92738 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
USP6NLQ92738 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC29.33■■■□□ 2.29
USP6NLQ92738 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC29.32■■■□□ 2.28
USP6NLQ92738 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC29.31■■■□□ 2.28
USP6NLQ92738 RPS2-210ENST00000530225 765 ntTSL 2 BASIC29.31■■■□□ 2.28
USP6NLQ92738 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
USP6NLQ92738 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
USP6NLQ92738 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
USP6NLQ92738 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
USP6NLQ92738 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
USP6NLQ92738 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC29.29■■■□□ 2.28
USP6NLQ92738 AC092296.2-201ENST00000589470 999 ntBASIC29.29■■■□□ 2.28
USP6NLQ92738 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
USP6NLQ92738 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC29.28■■■□□ 2.28
USP6NLQ92738 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
USP6NLQ92738 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
USP6NLQ92738 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
USP6NLQ92738 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.27■■■□□ 2.28
USP6NLQ92738 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
USP6NLQ92738 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
USP6NLQ92738 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
USP6NLQ92738 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC29.27■■■□□ 2.28
USP6NLQ92738 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
USP6NLQ92738 PEX7-203ENST00000541292 945 ntTSL 5 BASIC29.26■■■□□ 2.27
USP6NLQ92738 MIR219A2-201ENST00000608502 1504 ntBASIC29.25■■■□□ 2.27
USP6NLQ92738 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
USP6NLQ92738 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC29.25■■■□□ 2.27
USP6NLQ92738 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
USP6NLQ92738 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
USP6NLQ92738 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC29.24■■■□□ 2.27
USP6NLQ92738 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
USP6NLQ92738 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
USP6NLQ92738 KRT18P60-201ENST00000312876 1297 ntBASIC29.23■■■□□ 2.27
USP6NLQ92738 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
USP6NLQ92738 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
USP6NLQ92738 GFER-205ENST00000569451 517 ntTSL 5 BASIC29.22■■■□□ 2.27
USP6NLQ92738 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
USP6NLQ92738 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
USP6NLQ92738 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
USP6NLQ92738 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
USP6NLQ92738 AL135925.1-201ENST00000605920 1701 ntBASIC29.2■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms