Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 WHAMMP2-203ENST00000563942 1603 ntBASIC31.91■■■□□ 2.7
SNED1Q8TER0 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC31.91■■■□□ 2.7
SNED1Q8TER0 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
SNED1Q8TER0 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC31.9■■■□□ 2.7
SNED1Q8TER0 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
SNED1Q8TER0 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
SNED1Q8TER0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC31.89■■■□□ 2.7
SNED1Q8TER0 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SNED1Q8TER0 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
SNED1Q8TER0 HES4-202ENST00000428771 1040 ntTSL 2 BASIC31.87■■■□□ 2.69
SNED1Q8TER0 AC060814.1-201ENST00000554326 538 ntBASIC31.87■■■□□ 2.69
SNED1Q8TER0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC31.87■■■□□ 2.69
SNED1Q8TER0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.87■■■□□ 2.69
SNED1Q8TER0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.87■■■□□ 2.69
SNED1Q8TER0 AC018358.1-201ENST00000631079 1402 ntBASIC31.85■■■□□ 2.69
SNED1Q8TER0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC31.85■■■□□ 2.69
SNED1Q8TER0 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC31.85■■■□□ 2.69
SNED1Q8TER0 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC31.85■■■□□ 2.69
SNED1Q8TER0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
SNED1Q8TER0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC31.84■■■□□ 2.69
SNED1Q8TER0 AC148477.6-201ENST00000623746 465 ntBASIC31.84■■■□□ 2.69
SNED1Q8TER0 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
SNED1Q8TER0 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.84■■■□□ 2.69
SNED1Q8TER0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC31.83■■■□□ 2.69
SNED1Q8TER0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
SNED1Q8TER0 U85056.1-201ENST00000616429 682 ntBASIC31.83■■■□□ 2.69
SNED1Q8TER0 AC127502.1-201ENST00000399971 1502 ntBASIC31.83■■■□□ 2.69
SNED1Q8TER0 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC31.83■■■□□ 2.69
SNED1Q8TER0 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
SNED1Q8TER0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
SNED1Q8TER0 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
SNED1Q8TER0 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
SNED1Q8TER0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
SNED1Q8TER0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SNED1Q8TER0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
SNED1Q8TER0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
SNED1Q8TER0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
SNED1Q8TER0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
SNED1Q8TER0 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
SNED1Q8TER0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC31.77■■■□□ 2.68
SNED1Q8TER0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.77■■■□□ 2.68
SNED1Q8TER0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC31.76■■■□□ 2.68
SNED1Q8TER0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC31.76■■■□□ 2.68
SNED1Q8TER0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
SNED1Q8TER0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SNED1Q8TER0 AL033527.3-201ENST00000566366 1196 ntBASIC31.75■■■□□ 2.67
SNED1Q8TER0 GFER-205ENST00000569451 517 ntTSL 5 BASIC31.75■■■□□ 2.67
SNED1Q8TER0 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SNED1Q8TER0 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
SNED1Q8TER0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC31.74■■■□□ 2.67
SNED1Q8TER0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC31.74■■■□□ 2.67
SNED1Q8TER0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
SNED1Q8TER0 AC092296.2-201ENST00000589470 999 ntBASIC31.74■■■□□ 2.67
SNED1Q8TER0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC31.74■■■□□ 2.67
SNED1Q8TER0 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC31.73■■■□□ 2.67
SNED1Q8TER0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC31.73■■■□□ 2.67
SNED1Q8TER0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
SNED1Q8TER0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
SNED1Q8TER0 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
SNED1Q8TER0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
SNED1Q8TER0 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
SNED1Q8TER0 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
SNED1Q8TER0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC31.68■■■□□ 2.66
SNED1Q8TER0 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.68■■■□□ 2.66
SNED1Q8TER0 KRT18P60-201ENST00000312876 1297 ntBASIC31.67■■■□□ 2.66
SNED1Q8TER0 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC31.67■■■□□ 2.66
SNED1Q8TER0 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SNED1Q8TER0 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
SNED1Q8TER0 AC110285.7-201ENST00000624417 1536 ntBASIC31.67■■■□□ 2.66
SNED1Q8TER0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC31.66■■■□□ 2.66
SNED1Q8TER0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC31.66■■■□□ 2.66
SNED1Q8TER0 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
SNED1Q8TER0 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SNED1Q8TER0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC31.66■■■□□ 2.66
SNED1Q8TER0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC31.66■■■□□ 2.66
SNED1Q8TER0 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.65■■■□□ 2.66
SNED1Q8TER0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC31.65■■■□□ 2.66
SNED1Q8TER0 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.64■■■□□ 2.66
SNED1Q8TER0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
SNED1Q8TER0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC31.64■■■□□ 2.66
SNED1Q8TER0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC31.64■■■□□ 2.66
SNED1Q8TER0 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
SNED1Q8TER0 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
SNED1Q8TER0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC31.62■■■□□ 2.65
SNED1Q8TER0 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
SNED1Q8TER0 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC31.61■■■□□ 2.65
SNED1Q8TER0 MIR219A2-201ENST00000608502 1504 ntBASIC31.61■■■□□ 2.65
SNED1Q8TER0 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
SNED1Q8TER0 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
SNED1Q8TER0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
SNED1Q8TER0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
SNED1Q8TER0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC31.59■■■□□ 2.65
SNED1Q8TER0 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
SNED1Q8TER0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
SNED1Q8TER0 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
SNED1Q8TER0 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SNED1Q8TER0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC31.58■■■□□ 2.65
SNED1Q8TER0 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
SNED1Q8TER0 AC004987.1-201ENST00000428627 508 ntBASIC31.58■■■□□ 2.65
SNED1Q8TER0 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms