Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
TTC39CQ8N584 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.41■■□□□ 1.98
TTC39CQ8N584 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
TTC39CQ8N584 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC27.41■■□□□ 1.98
TTC39CQ8N584 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
TTC39CQ8N584 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
TTC39CQ8N584 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC27.4■■□□□ 1.98
TTC39CQ8N584 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
TTC39CQ8N584 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC27.4■■□□□ 1.98
TTC39CQ8N584 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.4■■□□□ 1.98
TTC39CQ8N584 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.39■■□□□ 1.98
TTC39CQ8N584 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC27.39■■□□□ 1.97
TTC39CQ8N584 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
TTC39CQ8N584 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
TTC39CQ8N584 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC27.38■■□□□ 1.97
TTC39CQ8N584 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
TTC39CQ8N584 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
TTC39CQ8N584 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC27.37■■□□□ 1.97
TTC39CQ8N584 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC27.37■■□□□ 1.97
TTC39CQ8N584 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC27.36■■□□□ 1.97
TTC39CQ8N584 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.36■■□□□ 1.97
TTC39CQ8N584 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TTC39CQ8N584 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
TTC39CQ8N584 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC27.36■■□□□ 1.97
TTC39CQ8N584 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
TTC39CQ8N584 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.35■■□□□ 1.97
TTC39CQ8N584 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
TTC39CQ8N584 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC27.34■■□□□ 1.97
TTC39CQ8N584 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC27.34■■□□□ 1.97
TTC39CQ8N584 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
TTC39CQ8N584 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
TTC39CQ8N584 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
TTC39CQ8N584 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC27.32■■□□□ 1.96
TTC39CQ8N584 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.32■■□□□ 1.96
TTC39CQ8N584 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
TTC39CQ8N584 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.3■■□□□ 1.96
TTC39CQ8N584 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TTC39CQ8N584 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TTC39CQ8N584 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TTC39CQ8N584 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC27.28■■□□□ 1.96
TTC39CQ8N584 DUX4L11-201ENST00000611504 1267 ntBASIC27.28■■□□□ 1.96
TTC39CQ8N584 DUX4L12-201ENST00000614593 1267 ntBASIC27.28■■□□□ 1.96
TTC39CQ8N584 DUX4L14-201ENST00000621227 1267 ntBASIC27.28■■□□□ 1.96
TTC39CQ8N584 AC100797.4-201ENST00000631653 1827 ntBASIC27.27■■□□□ 1.96
TTC39CQ8N584 AC139426.1-201ENST00000568218 2529 ntBASIC27.27■■□□□ 1.96
TTC39CQ8N584 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TTC39CQ8N584 AGPS-202ENST00000409888 815 ntTSL 4 BASIC27.27■■□□□ 1.96
TTC39CQ8N584 DUX4L13-201ENST00000554103 1267 ntBASIC27.27■■□□□ 1.96
TTC39CQ8N584 DUX4L15-201ENST00000611059 1267 ntBASIC27.27■■□□□ 1.96
TTC39CQ8N584 DUX4L23-201ENST00000615195 1269 ntBASIC27.27■■□□□ 1.96
TTC39CQ8N584 DUX4L24-201ENST00000617576 1269 ntBASIC27.27■■□□□ 1.96
TTC39CQ8N584 DUX4L22-201ENST00000618238 1269 ntBASIC27.27■■□□□ 1.96
TTC39CQ8N584 DUX4L20-201ENST00000619712 1269 ntBASIC27.27■■□□□ 1.96
TTC39CQ8N584 DUX4L21-201ENST00000622058 1269 ntBASIC27.27■■□□□ 1.96
TTC39CQ8N584 DUX4L10-201ENST00000622460 1267 ntBASIC27.27■■□□□ 1.96
TTC39CQ8N584 DUX4L25-201ENST00000624915 1269 ntBASIC27.27■■□□□ 1.96
TTC39CQ8N584 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC27.27■■□□□ 1.96
TTC39CQ8N584 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.26■■□□□ 1.95
TTC39CQ8N584 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
TTC39CQ8N584 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
TTC39CQ8N584 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TTC39CQ8N584 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
TTC39CQ8N584 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TTC39CQ8N584 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
TTC39CQ8N584 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC27.24■■□□□ 1.95
TTC39CQ8N584 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC27.24■■□□□ 1.95
TTC39CQ8N584 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC27.24■■□□□ 1.95
TTC39CQ8N584 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC27.24■■□□□ 1.95
TTC39CQ8N584 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC27.23■■□□□ 1.95
TTC39CQ8N584 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
TTC39CQ8N584 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC27.23■■□□□ 1.95
TTC39CQ8N584 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TTC39CQ8N584 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC27.22■■□□□ 1.95
TTC39CQ8N584 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
TTC39CQ8N584 MIR7108-201ENST00000614319 87 ntBASIC27.22■■□□□ 1.95
TTC39CQ8N584 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
TTC39CQ8N584 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
TTC39CQ8N584 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
TTC39CQ8N584 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC27.22■■□□□ 1.95
TTC39CQ8N584 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
TTC39CQ8N584 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC27.21■■□□□ 1.95
TTC39CQ8N584 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
TTC39CQ8N584 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC27.2■■□□□ 1.94
TTC39CQ8N584 MACF1-219ENST00000484793 834 ntTSL 2 BASIC27.2■■□□□ 1.94
TTC39CQ8N584 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.2■■□□□ 1.94
TTC39CQ8N584 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
TTC39CQ8N584 PROC-203ENST00000409048 1586 ntTSL 5 BASIC27.19■■□□□ 1.94
TTC39CQ8N584 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
TTC39CQ8N584 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC27.18■■□□□ 1.94
TTC39CQ8N584 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
TTC39CQ8N584 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
TTC39CQ8N584 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
TTC39CQ8N584 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC27.18■■□□□ 1.94
TTC39CQ8N584 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC27.17■■□□□ 1.94
TTC39CQ8N584 AC110285.7-201ENST00000624417 1536 ntBASIC27.17■■□□□ 1.94
TTC39CQ8N584 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
TTC39CQ8N584 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
TTC39CQ8N584 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
TTC39CQ8N584 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
TTC39CQ8N584 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms