Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC39.14■■■■□ 3.86
ABCA6Q8N139 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC39.14■■■■□ 3.86
ABCA6Q8N139 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC39.14■■■■□ 3.86
ABCA6Q8N139 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC39.13■■■■□ 3.86
ABCA6Q8N139 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC39.13■■■■□ 3.85
ABCA6Q8N139 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC39.13■■■■□ 3.85
ABCA6Q8N139 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC39.12■■■■□ 3.85
ABCA6Q8N139 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC39.11■■■■□ 3.85
ABCA6Q8N139 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC39.11■■■■□ 3.85
ABCA6Q8N139 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC39.11■■■■□ 3.85
ABCA6Q8N139 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC39.11■■■■□ 3.85
ABCA6Q8N139 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC39.1■■■■□ 3.85
ABCA6Q8N139 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC39.1■■■■□ 3.85
ABCA6Q8N139 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC39.09■■■■□ 3.85
ABCA6Q8N139 WHAMMP2-203ENST00000563942 1603 ntBASIC39.09■■■■□ 3.85
ABCA6Q8N139 KRT18P60-201ENST00000312876 1297 ntBASIC39.08■■■■□ 3.85
ABCA6Q8N139 AC148477.6-201ENST00000623746 465 ntBASIC39.08■■■■□ 3.85
ABCA6Q8N139 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC39.08■■■■□ 3.85
ABCA6Q8N139 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC39.08■■■■□ 3.85
ABCA6Q8N139 CHST11-203ENST00000547956 936 ntTSL 2 BASIC39.07■■■■□ 3.84
ABCA6Q8N139 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC39.07■■■■□ 3.84
ABCA6Q8N139 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC39.06■■■■□ 3.84
ABCA6Q8N139 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC39.05■■■■□ 3.84
ABCA6Q8N139 AC135983.2-203ENST00000454486 1613 ntBASIC39.05■■■■□ 3.84
ABCA6Q8N139 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC39.05■■■■□ 3.84
ABCA6Q8N139 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC39.04■■■■□ 3.84
ABCA6Q8N139 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC39.04■■■■□ 3.84
ABCA6Q8N139 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC39.04■■■■□ 3.84
ABCA6Q8N139 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC39.04■■■■□ 3.84
ABCA6Q8N139 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC39.03■■■■□ 3.84
ABCA6Q8N139 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC39.03■■■■□ 3.84
ABCA6Q8N139 AC092296.2-201ENST00000589470 999 ntBASIC39.03■■■■□ 3.84
ABCA6Q8N139 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC39.03■■■■□ 3.84
ABCA6Q8N139 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC39.01■■■■□ 3.84
ABCA6Q8N139 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC39.01■■■■□ 3.84
ABCA6Q8N139 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC39■■■■□ 3.83
ABCA6Q8N139 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC39■■■■□ 3.83
ABCA6Q8N139 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC39■■■■□ 3.83
ABCA6Q8N139 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC39■■■■□ 3.83
ABCA6Q8N139 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC39■■■■□ 3.83
ABCA6Q8N139 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC38.98■■■■□ 3.83
ABCA6Q8N139 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC38.98■■■■□ 3.83
ABCA6Q8N139 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC38.98■■■■□ 3.83
ABCA6Q8N139 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC38.97■■■■□ 3.83
ABCA6Q8N139 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC38.97■■■■□ 3.83
ABCA6Q8N139 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC38.97■■■■□ 3.83
ABCA6Q8N139 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC38.96■■■■□ 3.83
ABCA6Q8N139 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC38.96■■■■□ 3.83
ABCA6Q8N139 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC38.94■■■■□ 3.82
ABCA6Q8N139 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC38.93■■■■□ 3.82
ABCA6Q8N139 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC38.92■■■■□ 3.82
ABCA6Q8N139 TSPY13P-201ENST00000338964 914 ntBASIC38.92■■■■□ 3.82
ABCA6Q8N139 RARRES2P1-201ENST00000474487 481 ntBASIC38.92■■■■□ 3.82
ABCA6Q8N139 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC38.91■■■■□ 3.82
ABCA6Q8N139 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC38.89■■■■□ 3.82
ABCA6Q8N139 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC38.89■■■■□ 3.82
ABCA6Q8N139 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
ABCA6Q8N139 AC004987.1-201ENST00000428627 508 ntBASIC38.89■■■■□ 3.82
ABCA6Q8N139 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC38.88■■■■□ 3.81
ABCA6Q8N139 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC38.87■■■■□ 3.81
ABCA6Q8N139 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC38.87■■■■□ 3.81
ABCA6Q8N139 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC38.87■■■■□ 3.81
ABCA6Q8N139 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC38.86■■■■□ 3.81
ABCA6Q8N139 AC127502.1-201ENST00000399971 1502 ntBASIC38.86■■■■□ 3.81
ABCA6Q8N139 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC38.85■■■■□ 3.81
ABCA6Q8N139 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC38.85■■■■□ 3.81
ABCA6Q8N139 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC38.84■■■■□ 3.81
ABCA6Q8N139 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC38.84■■■■□ 3.81
ABCA6Q8N139 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC38.84■■■■□ 3.81
ABCA6Q8N139 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC38.84■■■■□ 3.81
ABCA6Q8N139 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC38.84■■■■□ 3.81
ABCA6Q8N139 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC38.83■■■■□ 3.81
ABCA6Q8N139 ATP5G2P3-201ENST00000429083 425 ntBASIC38.82■■■■□ 3.81
ABCA6Q8N139 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC38.82■■■■□ 3.81
ABCA6Q8N139 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC38.8■■■■□ 3.8
ABCA6Q8N139 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC38.79■■■■□ 3.8
ABCA6Q8N139 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC38.79■■■■□ 3.8
ABCA6Q8N139 GUK1-208ENST00000366728 842 ntTSL 2 BASIC38.78■■■■□ 3.8
ABCA6Q8N139 AL157400.5-201ENST00000507624 621 ntBASIC38.78■■■■□ 3.8
ABCA6Q8N139 RPS2-210ENST00000530225 765 ntTSL 2 BASIC38.78■■■■□ 3.8
ABCA6Q8N139 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC38.78■■■■□ 3.8
ABCA6Q8N139 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC38.78■■■■□ 3.8
ABCA6Q8N139 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC38.78■■■■□ 3.8
ABCA6Q8N139 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC38.78■■■■□ 3.8
ABCA6Q8N139 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC38.78■■■■□ 3.8
ABCA6Q8N139 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC38.78■■■■□ 3.8
ABCA6Q8N139 AC110285.7-201ENST00000624417 1536 ntBASIC38.78■■■■□ 3.8
ABCA6Q8N139 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC38.77■■■■□ 3.8
ABCA6Q8N139 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC38.77■■■■□ 3.8
ABCA6Q8N139 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC38.77■■■■□ 3.8
ABCA6Q8N139 MIR219A2-201ENST00000608502 1504 ntBASIC38.76■■■■□ 3.8
ABCA6Q8N139 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC38.76■■■■□ 3.8
ABCA6Q8N139 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC38.76■■■■□ 3.8
ABCA6Q8N139 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC38.76■■■■□ 3.79
ABCA6Q8N139 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC38.75■■■■□ 3.79
ABCA6Q8N139 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC38.74■■■■□ 3.79
ABCA6Q8N139 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC38.74■■■■□ 3.79
ABCA6Q8N139 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
ABCA6Q8N139 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC38.74■■■■□ 3.79
ABCA6Q8N139 PEX7-203ENST00000541292 945 ntTSL 5 BASIC38.74■■■■□ 3.79
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms