Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CPNE9Q8IYJ1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CPNE9Q8IYJ1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
CPNE9Q8IYJ1 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CPNE9Q8IYJ1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.29■■□□□ 1.64
CPNE9Q8IYJ1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.29■■□□□ 1.64
CPNE9Q8IYJ1 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CPNE9Q8IYJ1 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
CPNE9Q8IYJ1 AC100797.4-201ENST00000631653 1827 ntBASIC25.28■■□□□ 1.64
CPNE9Q8IYJ1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.28■■□□□ 1.64
CPNE9Q8IYJ1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
CPNE9Q8IYJ1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC25.28■■□□□ 1.64
CPNE9Q8IYJ1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
CPNE9Q8IYJ1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
CPNE9Q8IYJ1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.28■■□□□ 1.64
CPNE9Q8IYJ1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.28■■□□□ 1.64
CPNE9Q8IYJ1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.28■■□□□ 1.64
CPNE9Q8IYJ1 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.28■■□□□ 1.64
CPNE9Q8IYJ1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CPNE9Q8IYJ1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
CPNE9Q8IYJ1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.26■■□□□ 1.63
CPNE9Q8IYJ1 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.26■■□□□ 1.63
CPNE9Q8IYJ1 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CPNE9Q8IYJ1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CPNE9Q8IYJ1 AC135983.2-203ENST00000454486 1613 ntBASIC25.25■■□□□ 1.63
CPNE9Q8IYJ1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CPNE9Q8IYJ1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CPNE9Q8IYJ1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
CPNE9Q8IYJ1 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CPNE9Q8IYJ1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CPNE9Q8IYJ1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CPNE9Q8IYJ1 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
CPNE9Q8IYJ1 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CPNE9Q8IYJ1 RPS2P35-201ENST00000443417 897 ntBASIC25.23■■□□□ 1.63
CPNE9Q8IYJ1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CPNE9Q8IYJ1 WHAMMP2-203ENST00000563942 1603 ntBASIC25.23■■□□□ 1.63
CPNE9Q8IYJ1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CPNE9Q8IYJ1 LINC00273-201ENST00000539813 1452 ntBASIC25.22■■□□□ 1.63
CPNE9Q8IYJ1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.22■■□□□ 1.63
CPNE9Q8IYJ1 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CPNE9Q8IYJ1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.22■■□□□ 1.63
CPNE9Q8IYJ1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
CPNE9Q8IYJ1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
CPNE9Q8IYJ1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.21■■□□□ 1.63
CPNE9Q8IYJ1 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.21■■□□□ 1.63
CPNE9Q8IYJ1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CPNE9Q8IYJ1 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CPNE9Q8IYJ1 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.2■■□□□ 1.62
CPNE9Q8IYJ1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CPNE9Q8IYJ1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.2■■□□□ 1.62
CPNE9Q8IYJ1 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CPNE9Q8IYJ1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CPNE9Q8IYJ1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.19■■□□□ 1.62
CPNE9Q8IYJ1 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CPNE9Q8IYJ1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CPNE9Q8IYJ1 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.18■■□□□ 1.62
CPNE9Q8IYJ1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.18■■□□□ 1.62
CPNE9Q8IYJ1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.18■■□□□ 1.62
CPNE9Q8IYJ1 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.17■■□□□ 1.62
CPNE9Q8IYJ1 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CPNE9Q8IYJ1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
CPNE9Q8IYJ1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CPNE9Q8IYJ1 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
CPNE9Q8IYJ1 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CPNE9Q8IYJ1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CPNE9Q8IYJ1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CPNE9Q8IYJ1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CPNE9Q8IYJ1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CPNE9Q8IYJ1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CPNE9Q8IYJ1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.15■■□□□ 1.62
CPNE9Q8IYJ1 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CPNE9Q8IYJ1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.15■■□□□ 1.62
CPNE9Q8IYJ1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.15■■□□□ 1.62
CPNE9Q8IYJ1 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CPNE9Q8IYJ1 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CPNE9Q8IYJ1 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CPNE9Q8IYJ1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.13■■□□□ 1.61
CPNE9Q8IYJ1 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CPNE9Q8IYJ1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CPNE9Q8IYJ1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CPNE9Q8IYJ1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC25.12■■□□□ 1.61
CPNE9Q8IYJ1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
CPNE9Q8IYJ1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.12■■□□□ 1.61
CPNE9Q8IYJ1 AC021231.2-201ENST00000594613 730 ntBASIC25.12■■□□□ 1.61
CPNE9Q8IYJ1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CPNE9Q8IYJ1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CPNE9Q8IYJ1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.12■■□□□ 1.61
CPNE9Q8IYJ1 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CPNE9Q8IYJ1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.11■■□□□ 1.61
CPNE9Q8IYJ1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.1■■□□□ 1.61
CPNE9Q8IYJ1 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CPNE9Q8IYJ1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CPNE9Q8IYJ1 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
CPNE9Q8IYJ1 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
CPNE9Q8IYJ1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CPNE9Q8IYJ1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CPNE9Q8IYJ1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CPNE9Q8IYJ1 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CPNE9Q8IYJ1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CPNE9Q8IYJ1 DUX4L29-201ENST00000425409 679 ntBASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms