Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
ZC3HC1Q86WB0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.57■■□□□ 1.68
ZC3HC1Q86WB0 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
ZC3HC1Q86WB0 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ZC3HC1Q86WB0 AC100797.4-201ENST00000631653 1827 ntBASIC25.56■■□□□ 1.68
ZC3HC1Q86WB0 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
ZC3HC1Q86WB0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.55■■□□□ 1.68
ZC3HC1Q86WB0 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
ZC3HC1Q86WB0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
ZC3HC1Q86WB0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.54■■□□□ 1.68
ZC3HC1Q86WB0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
ZC3HC1Q86WB0 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ZC3HC1Q86WB0 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ZC3HC1Q86WB0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ZC3HC1Q86WB0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ZC3HC1Q86WB0 BX255925.1-201ENST00000566954 1854 ntBASIC25.52■■□□□ 1.68
ZC3HC1Q86WB0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.52■■□□□ 1.68
ZC3HC1Q86WB0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC25.52■■□□□ 1.68
ZC3HC1Q86WB0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ZC3HC1Q86WB0 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.52■■□□□ 1.68
ZC3HC1Q86WB0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ZC3HC1Q86WB0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ZC3HC1Q86WB0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
ZC3HC1Q86WB0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ZC3HC1Q86WB0 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
ZC3HC1Q86WB0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
ZC3HC1Q86WB0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ZC3HC1Q86WB0 AL121749.1-202ENST00000609313 2153 ntBASIC25.49■■□□□ 1.67
ZC3HC1Q86WB0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ZC3HC1Q86WB0 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ZC3HC1Q86WB0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
ZC3HC1Q86WB0 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.48■■□□□ 1.67
ZC3HC1Q86WB0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
ZC3HC1Q86WB0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
ZC3HC1Q86WB0 DUX4L28-201ENST00000623687 678 ntBASIC25.47■■□□□ 1.67
ZC3HC1Q86WB0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
ZC3HC1Q86WB0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ZC3HC1Q86WB0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.47■■□□□ 1.67
ZC3HC1Q86WB0 AC108673.1-201ENST00000510422 1159 ntBASIC25.46■■□□□ 1.67
ZC3HC1Q86WB0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
ZC3HC1Q86WB0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
ZC3HC1Q86WB0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
ZC3HC1Q86WB0 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ZC3HC1Q86WB0 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ZC3HC1Q86WB0 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.45■■□□□ 1.66
ZC3HC1Q86WB0 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ZC3HC1Q86WB0 MIR6090-201ENST00000622481 60 ntBASIC25.44■■□□□ 1.66
ZC3HC1Q86WB0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
ZC3HC1Q86WB0 LINC01003-201ENST00000564834 1764 ntBASIC25.44■■□□□ 1.66
ZC3HC1Q86WB0 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
ZC3HC1Q86WB0 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.43■■□□□ 1.66
ZC3HC1Q86WB0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
ZC3HC1Q86WB0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.43■■□□□ 1.66
ZC3HC1Q86WB0 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
ZC3HC1Q86WB0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.43■■□□□ 1.66
ZC3HC1Q86WB0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
ZC3HC1Q86WB0 AC135983.2-203ENST00000454486 1613 ntBASIC25.42■■□□□ 1.66
ZC3HC1Q86WB0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.42■■□□□ 1.66
ZC3HC1Q86WB0 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.42■■□□□ 1.66
ZC3HC1Q86WB0 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.42■■□□□ 1.66
ZC3HC1Q86WB0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.41■■□□□ 1.66
ZC3HC1Q86WB0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
ZC3HC1Q86WB0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.41■■□□□ 1.66
ZC3HC1Q86WB0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
ZC3HC1Q86WB0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ZC3HC1Q86WB0 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.4■■□□□ 1.66
ZC3HC1Q86WB0 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
ZC3HC1Q86WB0 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.65
ZC3HC1Q86WB0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.39■■□□□ 1.65
ZC3HC1Q86WB0 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.39■■□□□ 1.65
ZC3HC1Q86WB0 AP002414.2-202ENST00000590929 1450 ntBASIC25.39■■□□□ 1.65
ZC3HC1Q86WB0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
ZC3HC1Q86WB0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.38■■□□□ 1.65
ZC3HC1Q86WB0 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ZC3HC1Q86WB0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
ZC3HC1Q86WB0 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
ZC3HC1Q86WB0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.38■■□□□ 1.65
ZC3HC1Q86WB0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ZC3HC1Q86WB0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ZC3HC1Q86WB0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ZC3HC1Q86WB0 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.37■■□□□ 1.65
ZC3HC1Q86WB0 MIR3665-201ENST00000578708 105 ntBASIC25.37■■□□□ 1.65
ZC3HC1Q86WB0 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
ZC3HC1Q86WB0 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
ZC3HC1Q86WB0 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
ZC3HC1Q86WB0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.37■■□□□ 1.65
ZC3HC1Q86WB0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
ZC3HC1Q86WB0 WHAMMP2-203ENST00000563942 1603 ntBASIC25.35■■□□□ 1.65
ZC3HC1Q86WB0 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
ZC3HC1Q86WB0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
ZC3HC1Q86WB0 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.35■■□□□ 1.65
ZC3HC1Q86WB0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.35■■□□□ 1.65
ZC3HC1Q86WB0 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ZC3HC1Q86WB0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
ZC3HC1Q86WB0 LINC00273-201ENST00000539813 1452 ntBASIC25.33■■□□□ 1.65
ZC3HC1Q86WB0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
ZC3HC1Q86WB0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ZC3HC1Q86WB0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
ZC3HC1Q86WB0 AP006261.1-201ENST00000584783 668 ntBASIC25.32■■□□□ 1.64
ZC3HC1Q86WB0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms