Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
LYSMD3Q7Z3D4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.81■■□□□ 1.72
LYSMD3Q7Z3D4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
LYSMD3Q7Z3D4 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
LYSMD3Q7Z3D4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
LYSMD3Q7Z3D4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.8■■□□□ 1.72
LYSMD3Q7Z3D4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
LYSMD3Q7Z3D4 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.79■■□□□ 1.72
LYSMD3Q7Z3D4 MIR7108-201ENST00000614319 87 ntBASIC25.79■■□□□ 1.72
LYSMD3Q7Z3D4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
LYSMD3Q7Z3D4 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
LYSMD3Q7Z3D4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.78■■□□□ 1.72
LYSMD3Q7Z3D4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
LYSMD3Q7Z3D4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
LYSMD3Q7Z3D4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
LYSMD3Q7Z3D4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
LYSMD3Q7Z3D4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.77■■□□□ 1.72
LYSMD3Q7Z3D4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.77■■□□□ 1.72
LYSMD3Q7Z3D4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
LYSMD3Q7Z3D4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.76■■□□□ 1.71
LYSMD3Q7Z3D4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
LYSMD3Q7Z3D4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.75■■□□□ 1.71
LYSMD3Q7Z3D4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.75■■□□□ 1.71
LYSMD3Q7Z3D4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
LYSMD3Q7Z3D4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
LYSMD3Q7Z3D4 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.73■■□□□ 1.71
LYSMD3Q7Z3D4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.73■■□□□ 1.71
LYSMD3Q7Z3D4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.73■■□□□ 1.71
LYSMD3Q7Z3D4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
LYSMD3Q7Z3D4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
LYSMD3Q7Z3D4 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
LYSMD3Q7Z3D4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.72■■□□□ 1.71
LYSMD3Q7Z3D4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.72■■□□□ 1.71
LYSMD3Q7Z3D4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
LYSMD3Q7Z3D4 LINC01971-201ENST00000617888 1048 ntBASIC25.71■■□□□ 1.71
LYSMD3Q7Z3D4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
LYSMD3Q7Z3D4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
LYSMD3Q7Z3D4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
LYSMD3Q7Z3D4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.7■■□□□ 1.7
LYSMD3Q7Z3D4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.7■■□□□ 1.7
LYSMD3Q7Z3D4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
LYSMD3Q7Z3D4 AC100797.4-201ENST00000631653 1827 ntBASIC25.7■■□□□ 1.7
LYSMD3Q7Z3D4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.69■■□□□ 1.7
LYSMD3Q7Z3D4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
LYSMD3Q7Z3D4 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.69■■□□□ 1.7
LYSMD3Q7Z3D4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
LYSMD3Q7Z3D4 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.69■■□□□ 1.7
LYSMD3Q7Z3D4 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
LYSMD3Q7Z3D4 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
LYSMD3Q7Z3D4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.67■■□□□ 1.7
LYSMD3Q7Z3D4 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.67■■□□□ 1.7
LYSMD3Q7Z3D4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
LYSMD3Q7Z3D4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.66■■□□□ 1.7
LYSMD3Q7Z3D4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
LYSMD3Q7Z3D4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
LYSMD3Q7Z3D4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC25.66■■□□□ 1.7
LYSMD3Q7Z3D4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
LYSMD3Q7Z3D4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
LYSMD3Q7Z3D4 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
LYSMD3Q7Z3D4 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.65■■□□□ 1.7
LYSMD3Q7Z3D4 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
LYSMD3Q7Z3D4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.64■■□□□ 1.7
LYSMD3Q7Z3D4 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.64■■□□□ 1.7
LYSMD3Q7Z3D4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.64■■□□□ 1.7
LYSMD3Q7Z3D4 DUX4L11-201ENST00000611504 1267 ntBASIC25.64■■□□□ 1.7
LYSMD3Q7Z3D4 DUX4L12-201ENST00000614593 1267 ntBASIC25.64■■□□□ 1.7
LYSMD3Q7Z3D4 DUX4L14-201ENST00000621227 1267 ntBASIC25.64■■□□□ 1.7
LYSMD3Q7Z3D4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
LYSMD3Q7Z3D4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
LYSMD3Q7Z3D4 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
LYSMD3Q7Z3D4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.63■■□□□ 1.69
LYSMD3Q7Z3D4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
LYSMD3Q7Z3D4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.62■■□□□ 1.69
LYSMD3Q7Z3D4 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.62■■□□□ 1.69
LYSMD3Q7Z3D4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.62■■□□□ 1.69
LYSMD3Q7Z3D4 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
LYSMD3Q7Z3D4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
LYSMD3Q7Z3D4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
LYSMD3Q7Z3D4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
LYSMD3Q7Z3D4 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
LYSMD3Q7Z3D4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
LYSMD3Q7Z3D4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
LYSMD3Q7Z3D4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.6■■□□□ 1.69
LYSMD3Q7Z3D4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.6■■□□□ 1.69
LYSMD3Q7Z3D4 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.6■■□□□ 1.69
LYSMD3Q7Z3D4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
LYSMD3Q7Z3D4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
LYSMD3Q7Z3D4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
LYSMD3Q7Z3D4 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
LYSMD3Q7Z3D4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.59■■□□□ 1.69
LYSMD3Q7Z3D4 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.59■■□□□ 1.69
LYSMD3Q7Z3D4 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
LYSMD3Q7Z3D4 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.58■■□□□ 1.69
LYSMD3Q7Z3D4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.58■■□□□ 1.69
LYSMD3Q7Z3D4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
LYSMD3Q7Z3D4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
LYSMD3Q7Z3D4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
LYSMD3Q7Z3D4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
LYSMD3Q7Z3D4 DUX4L13-201ENST00000554103 1267 ntBASIC25.56■■□□□ 1.68
LYSMD3Q7Z3D4 DUX4L15-201ENST00000611059 1267 ntBASIC25.56■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms