Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC14.71□□□□□ -0.05
UBR4Q5T4S7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC14.71□□□□□ -0.05
UBR4Q5T4S7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC14.71□□□□□ -0.05
UBR4Q5T4S7 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBR4Q5T4S7 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
UBR4Q5T4S7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
UBR4Q5T4S7 AC060814.1-201ENST00000554326 538 ntBASIC14.69□□□□□ -0.06
UBR4Q5T4S7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
UBR4Q5T4S7 SPCS2P3-201ENST00000500401 656 ntBASIC14.68□□□□□ -0.06
UBR4Q5T4S7 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
UBR4Q5T4S7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC14.68□□□□□ -0.06
UBR4Q5T4S7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
UBR4Q5T4S7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC14.67□□□□□ -0.06
UBR4Q5T4S7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
UBR4Q5T4S7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC14.67□□□□□ -0.06
UBR4Q5T4S7 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBR4Q5T4S7 AC104564.3-201ENST00000582367 638 ntBASIC14.66□□□□□ -0.06
UBR4Q5T4S7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
UBR4Q5T4S7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
UBR4Q5T4S7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBR4Q5T4S7 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
UBR4Q5T4S7 AC103834.1-201ENST00000520383 144 ntBASIC14.65□□□□□ -0.06
UBR4Q5T4S7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC14.65□□□□□ -0.06
UBR4Q5T4S7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UBR4Q5T4S7 AL139246.5-201ENST00000606645 996 ntBASIC14.64□□□□□ -0.07
UBR4Q5T4S7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
UBR4Q5T4S7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBR4Q5T4S7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC14.63□□□□□ -0.07
UBR4Q5T4S7 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UBR4Q5T4S7 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UBR4Q5T4S7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC14.62□□□□□ -0.07
UBR4Q5T4S7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBR4Q5T4S7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBR4Q5T4S7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC14.62□□□□□ -0.07
UBR4Q5T4S7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
UBR4Q5T4S7 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC14.62□□□□□ -0.07
UBR4Q5T4S7 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UBR4Q5T4S7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
UBR4Q5T4S7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBR4Q5T4S7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UBR4Q5T4S7 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
UBR4Q5T4S7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
UBR4Q5T4S7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC14.6□□□□□ -0.07
UBR4Q5T4S7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBR4Q5T4S7 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBR4Q5T4S7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
UBR4Q5T4S7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
UBR4Q5T4S7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC14.59□□□□□ -0.07
UBR4Q5T4S7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBR4Q5T4S7 ILK-212ENST00000532063 1617 ntTSL 2 BASIC14.59□□□□□ -0.07
UBR4Q5T4S7 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC14.59□□□□□ -0.07
UBR4Q5T4S7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
UBR4Q5T4S7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
UBR4Q5T4S7 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC14.58□□□□□ -0.07
UBR4Q5T4S7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
UBR4Q5T4S7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC14.58□□□□□ -0.07
UBR4Q5T4S7 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
UBR4Q5T4S7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC14.58□□□□□ -0.08
UBR4Q5T4S7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC14.58□□□□□ -0.08
UBR4Q5T4S7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
UBR4Q5T4S7 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
UBR4Q5T4S7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.57□□□□□ -0.08
UBR4Q5T4S7 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBR4Q5T4S7 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UBR4Q5T4S7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
UBR4Q5T4S7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
UBR4Q5T4S7 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
UBR4Q5T4S7 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UBR4Q5T4S7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC14.57□□□□□ -0.08
UBR4Q5T4S7 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBR4Q5T4S7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
UBR4Q5T4S7 AC010980.1-201ENST00000587192 1142 ntBASIC14.56□□□□□ -0.08
UBR4Q5T4S7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBR4Q5T4S7 BHLHE23-202ENST00000612929 1109 ntBASIC14.55□□□□□ -0.08
UBR4Q5T4S7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC14.55□□□□□ -0.08
UBR4Q5T4S7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC14.55□□□□□ -0.08
UBR4Q5T4S7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
UBR4Q5T4S7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UBR4Q5T4S7 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC14.54□□□□□ -0.08
UBR4Q5T4S7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC14.54□□□□□ -0.08
UBR4Q5T4S7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
UBR4Q5T4S7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
UBR4Q5T4S7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
UBR4Q5T4S7 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
UBR4Q5T4S7 AC092296.2-201ENST00000589470 999 ntBASIC14.52□□□□□ -0.08
UBR4Q5T4S7 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
UBR4Q5T4S7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
UBR4Q5T4S7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC14.52□□□□□ -0.09
UBR4Q5T4S7 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
UBR4Q5T4S7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC14.52□□□□□ -0.09
UBR4Q5T4S7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC14.51□□□□□ -0.09
UBR4Q5T4S7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBR4Q5T4S7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UBR4Q5T4S7 AL592293.1-201ENST00000502889 1188 ntBASIC14.51□□□□□ -0.09
UBR4Q5T4S7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
UBR4Q5T4S7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBR4Q5T4S7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBR4Q5T4S7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
UBR4Q5T4S7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
UBR4Q5T4S7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms