Protein–RNA interactions for Protein: Q5SZI1

LDLRAD2, Low-density lipoprotein receptor class A domain-containing protein 2, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD2Q5SZI1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.9■□□□□ 0.94
LDLRAD2Q5SZI1 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
LDLRAD2Q5SZI1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LDLRAD2Q5SZI1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.9■□□□□ 0.94
LDLRAD2Q5SZI1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
LDLRAD2Q5SZI1 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LDLRAD2Q5SZI1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LDLRAD2Q5SZI1 LINC01971-201ENST00000617888 1048 ntBASIC20.89■□□□□ 0.93
LDLRAD2Q5SZI1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LDLRAD2Q5SZI1 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LDLRAD2Q5SZI1 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.88■□□□□ 0.93
LDLRAD2Q5SZI1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LDLRAD2Q5SZI1 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDLRAD2Q5SZI1 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LDLRAD2Q5SZI1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LDLRAD2Q5SZI1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LDLRAD2Q5SZI1 DUX4L11-201ENST00000611504 1267 ntBASIC20.86■□□□□ 0.93
LDLRAD2Q5SZI1 DUX4L12-201ENST00000614593 1267 ntBASIC20.86■□□□□ 0.93
LDLRAD2Q5SZI1 DUX4L14-201ENST00000621227 1267 ntBASIC20.86■□□□□ 0.93
LDLRAD2Q5SZI1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LDLRAD2Q5SZI1 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
LDLRAD2Q5SZI1 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LDLRAD2Q5SZI1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
LDLRAD2Q5SZI1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.84■□□□□ 0.93
LDLRAD2Q5SZI1 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.84■□□□□ 0.93
LDLRAD2Q5SZI1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.84■□□□□ 0.93
LDLRAD2Q5SZI1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.84■□□□□ 0.93
LDLRAD2Q5SZI1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LDLRAD2Q5SZI1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.84■□□□□ 0.93
LDLRAD2Q5SZI1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.83■□□□□ 0.93
LDLRAD2Q5SZI1 AP004833.2-201ENST00000532228 1454 ntBASIC20.83■□□□□ 0.93
LDLRAD2Q5SZI1 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
LDLRAD2Q5SZI1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.83■□□□□ 0.92
LDLRAD2Q5SZI1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.82■□□□□ 0.92
LDLRAD2Q5SZI1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LDLRAD2Q5SZI1 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.82■□□□□ 0.92
LDLRAD2Q5SZI1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.81■□□□□ 0.92
LDLRAD2Q5SZI1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
LDLRAD2Q5SZI1 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
LDLRAD2Q5SZI1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.81■□□□□ 0.92
LDLRAD2Q5SZI1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.81■□□□□ 0.92
LDLRAD2Q5SZI1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.81■□□□□ 0.92
LDLRAD2Q5SZI1 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LDLRAD2Q5SZI1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LDLRAD2Q5SZI1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LDLRAD2Q5SZI1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
LDLRAD2Q5SZI1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LDLRAD2Q5SZI1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
LDLRAD2Q5SZI1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LDLRAD2Q5SZI1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.8■□□□□ 0.92
LDLRAD2Q5SZI1 AC100797.4-201ENST00000631653 1827 ntBASIC20.8■□□□□ 0.92
LDLRAD2Q5SZI1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.8■□□□□ 0.92
LDLRAD2Q5SZI1 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
LDLRAD2Q5SZI1 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.79■□□□□ 0.92
LDLRAD2Q5SZI1 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LDLRAD2Q5SZI1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LDLRAD2Q5SZI1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LDLRAD2Q5SZI1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LDLRAD2Q5SZI1 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LDLRAD2Q5SZI1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LDLRAD2Q5SZI1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.78■□□□□ 0.92
LDLRAD2Q5SZI1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LDLRAD2Q5SZI1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LDLRAD2Q5SZI1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.78■□□□□ 0.92
LDLRAD2Q5SZI1 DUX4L13-201ENST00000554103 1267 ntBASIC20.78■□□□□ 0.92
LDLRAD2Q5SZI1 DUX4L15-201ENST00000611059 1267 ntBASIC20.78■□□□□ 0.92
LDLRAD2Q5SZI1 DUX4L23-201ENST00000615195 1269 ntBASIC20.78■□□□□ 0.92
LDLRAD2Q5SZI1 DUX4L24-201ENST00000617576 1269 ntBASIC20.78■□□□□ 0.92
LDLRAD2Q5SZI1 DUX4L22-201ENST00000618238 1269 ntBASIC20.78■□□□□ 0.92
LDLRAD2Q5SZI1 DUX4L20-201ENST00000619712 1269 ntBASIC20.78■□□□□ 0.92
LDLRAD2Q5SZI1 DUX4L21-201ENST00000622058 1269 ntBASIC20.78■□□□□ 0.92
LDLRAD2Q5SZI1 DUX4L10-201ENST00000622460 1267 ntBASIC20.78■□□□□ 0.92
LDLRAD2Q5SZI1 CR559946.2-201ENST00000623684 991 ntBASIC20.78■□□□□ 0.92
LDLRAD2Q5SZI1 DUX4L25-201ENST00000624915 1269 ntBASIC20.78■□□□□ 0.92
LDLRAD2Q5SZI1 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.78■□□□□ 0.92
LDLRAD2Q5SZI1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LDLRAD2Q5SZI1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
LDLRAD2Q5SZI1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.78■□□□□ 0.92
LDLRAD2Q5SZI1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LDLRAD2Q5SZI1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.77■□□□□ 0.92
LDLRAD2Q5SZI1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.77■□□□□ 0.91
LDLRAD2Q5SZI1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAD2Q5SZI1 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAD2Q5SZI1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAD2Q5SZI1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAD2Q5SZI1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.76■□□□□ 0.91
LDLRAD2Q5SZI1 MIR3648-2-201ENST00000581792 180 ntBASIC20.76■□□□□ 0.91
LDLRAD2Q5SZI1 MIR3648-1-201ENST00000615959 180 ntBASIC20.76■□□□□ 0.91
LDLRAD2Q5SZI1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LDLRAD2Q5SZI1 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
LDLRAD2Q5SZI1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.76■□□□□ 0.91
LDLRAD2Q5SZI1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.76■□□□□ 0.91
LDLRAD2Q5SZI1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
LDLRAD2Q5SZI1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.75■□□□□ 0.91
LDLRAD2Q5SZI1 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.75■□□□□ 0.91
LDLRAD2Q5SZI1 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LDLRAD2Q5SZI1 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.75■□□□□ 0.91
LDLRAD2Q5SZI1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LDLRAD2Q5SZI1 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LDLRAD2Q5SZI1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms