Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TM4SF20Q53R12 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TM4SF20Q53R12 AC021231.2-201ENST00000594613 730 ntBASIC19.73■□□□□ 0.75
TM4SF20Q53R12 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TM4SF20Q53R12 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TM4SF20Q53R12 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TM4SF20Q53R12 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TM4SF20Q53R12 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TM4SF20Q53R12 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TM4SF20Q53R12 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
TM4SF20Q53R12 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TM4SF20Q53R12 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TM4SF20Q53R12 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC19.71■□□□□ 0.75
TM4SF20Q53R12 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TM4SF20Q53R12 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TM4SF20Q53R12 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF20Q53R12 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TM4SF20Q53R12 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF20Q53R12 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.7■□□□□ 0.74
TM4SF20Q53R12 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TM4SF20Q53R12 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TM4SF20Q53R12 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
TM4SF20Q53R12 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.69■□□□□ 0.74
TM4SF20Q53R12 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.69■□□□□ 0.74
TM4SF20Q53R12 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.69■□□□□ 0.74
TM4SF20Q53R12 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.69■□□□□ 0.74
TM4SF20Q53R12 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.69■□□□□ 0.74
TM4SF20Q53R12 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TM4SF20Q53R12 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TM4SF20Q53R12 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF20Q53R12 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF20Q53R12 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
TM4SF20Q53R12 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TM4SF20Q53R12 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TM4SF20Q53R12 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF20Q53R12 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.67■□□□□ 0.74
TM4SF20Q53R12 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TM4SF20Q53R12 LINC00273-201ENST00000539813 1452 ntBASIC19.67■□□□□ 0.74
TM4SF20Q53R12 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TM4SF20Q53R12 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TM4SF20Q53R12 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.66■□□□□ 0.74
TM4SF20Q53R12 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.66■□□□□ 0.74
TM4SF20Q53R12 AP004833.2-201ENST00000532228 1454 ntBASIC19.66■□□□□ 0.74
TM4SF20Q53R12 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM4SF20Q53R12 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TM4SF20Q53R12 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM4SF20Q53R12 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TM4SF20Q53R12 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.65■□□□□ 0.74
TM4SF20Q53R12 CALM3-209ENST00000597743 577 ntTSL 4 BASIC19.65■□□□□ 0.74
TM4SF20Q53R12 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.65■□□□□ 0.74
TM4SF20Q53R12 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TM4SF20Q53R12 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
TM4SF20Q53R12 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19.64■□□□□ 0.74
TM4SF20Q53R12 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF20Q53R12 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF20Q53R12 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.64■□□□□ 0.73
TM4SF20Q53R12 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF20Q53R12 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.64■□□□□ 0.73
TM4SF20Q53R12 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TM4SF20Q53R12 AC135983.2-203ENST00000454486 1613 ntBASIC19.63■□□□□ 0.73
TM4SF20Q53R12 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.63■□□□□ 0.73
TM4SF20Q53R12 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF20Q53R12 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.63■□□□□ 0.73
TM4SF20Q53R12 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF20Q53R12 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TM4SF20Q53R12 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC19.62■□□□□ 0.73
TM4SF20Q53R12 WHAMMP2-203ENST00000563942 1603 ntBASIC19.62■□□□□ 0.73
TM4SF20Q53R12 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TM4SF20Q53R12 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TM4SF20Q53R12 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TM4SF20Q53R12 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TM4SF20Q53R12 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.61■□□□□ 0.73
TM4SF20Q53R12 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TM4SF20Q53R12 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TM4SF20Q53R12 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
TM4SF20Q53R12 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TM4SF20Q53R12 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TM4SF20Q53R12 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TM4SF20Q53R12 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TM4SF20Q53R12 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TM4SF20Q53R12 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC19.6■□□□□ 0.73
TM4SF20Q53R12 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC19.6■□□□□ 0.73
TM4SF20Q53R12 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TM4SF20Q53R12 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF20Q53R12 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.59■□□□□ 0.73
TM4SF20Q53R12 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.59■□□□□ 0.73
TM4SF20Q53R12 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TM4SF20Q53R12 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TM4SF20Q53R12 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TM4SF20Q53R12 AC100797.4-201ENST00000631653 1827 ntBASIC19.58■□□□□ 0.73
TM4SF20Q53R12 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.58■□□□□ 0.72
TM4SF20Q53R12 ABHD17AP4-201ENST00000411545 909 ntBASIC19.58■□□□□ 0.72
TM4SF20Q53R12 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TM4SF20Q53R12 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM4SF20Q53R12 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TM4SF20Q53R12 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TM4SF20Q53R12 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.56■□□□□ 0.72
TM4SF20Q53R12 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF20Q53R12 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF20Q53R12 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms