Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CHRFAM7AQ494W8 MIR3648-2-201ENST00000581792 180 ntBASIC22.19■■□□□ 1.14
CHRFAM7AQ494W8 AC016575.1-201ENST00000607026 382 ntBASIC22.19■■□□□ 1.14
CHRFAM7AQ494W8 MIR3648-1-201ENST00000615959 180 ntBASIC22.19■■□□□ 1.14
CHRFAM7AQ494W8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHRFAM7AQ494W8 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHRFAM7AQ494W8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHRFAM7AQ494W8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.18■■□□□ 1.14
CHRFAM7AQ494W8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHRFAM7AQ494W8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHRFAM7AQ494W8 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHRFAM7AQ494W8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.17■■□□□ 1.14
CHRFAM7AQ494W8 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.17■■□□□ 1.14
CHRFAM7AQ494W8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CHRFAM7AQ494W8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHRFAM7AQ494W8 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.16■■□□□ 1.14
CHRFAM7AQ494W8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.16■■□□□ 1.14
CHRFAM7AQ494W8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC22.16■■□□□ 1.14
CHRFAM7AQ494W8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHRFAM7AQ494W8 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
CHRFAM7AQ494W8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.15■■□□□ 1.14
CHRFAM7AQ494W8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
CHRFAM7AQ494W8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
CHRFAM7AQ494W8 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.14■■□□□ 1.13
CHRFAM7AQ494W8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC22.14■■□□□ 1.13
CHRFAM7AQ494W8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHRFAM7AQ494W8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC22.13■■□□□ 1.13
CHRFAM7AQ494W8 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.13■■□□□ 1.13
CHRFAM7AQ494W8 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CHRFAM7AQ494W8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHRFAM7AQ494W8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
CHRFAM7AQ494W8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CHRFAM7AQ494W8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHRFAM7AQ494W8 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHRFAM7AQ494W8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHRFAM7AQ494W8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC22.1■■□□□ 1.13
CHRFAM7AQ494W8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
CHRFAM7AQ494W8 AC108673.1-201ENST00000510422 1159 ntBASIC22.1■■□□□ 1.13
CHRFAM7AQ494W8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CHRFAM7AQ494W8 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHRFAM7AQ494W8 AL139393.2-201ENST00000608721 2025 ntBASIC22.09■■□□□ 1.13
CHRFAM7AQ494W8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHRFAM7AQ494W8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHRFAM7AQ494W8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CHRFAM7AQ494W8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC22.08■■□□□ 1.13
CHRFAM7AQ494W8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
CHRFAM7AQ494W8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.12
CHRFAM7AQ494W8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CHRFAM7AQ494W8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CHRFAM7AQ494W8 DUX4L11-201ENST00000611504 1267 ntBASIC22.07■■□□□ 1.12
CHRFAM7AQ494W8 DUX4L12-201ENST00000614593 1267 ntBASIC22.07■■□□□ 1.12
CHRFAM7AQ494W8 DUX4L14-201ENST00000621227 1267 ntBASIC22.07■■□□□ 1.12
CHRFAM7AQ494W8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
CHRFAM7AQ494W8 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CHRFAM7AQ494W8 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.06■■□□□ 1.12
CHRFAM7AQ494W8 LINC01971-201ENST00000617888 1048 ntBASIC22.06■■□□□ 1.12
CHRFAM7AQ494W8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CHRFAM7AQ494W8 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
CHRFAM7AQ494W8 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CHRFAM7AQ494W8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC22.05■■□□□ 1.12
CHRFAM7AQ494W8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC22.05■■□□□ 1.12
CHRFAM7AQ494W8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CHRFAM7AQ494W8 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CHRFAM7AQ494W8 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.04■■□□□ 1.12
CHRFAM7AQ494W8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC22.03■■□□□ 1.12
CHRFAM7AQ494W8 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.03■■□□□ 1.12
CHRFAM7AQ494W8 CR559946.2-201ENST00000623684 991 ntBASIC22.03■■□□□ 1.12
CHRFAM7AQ494W8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CHRFAM7AQ494W8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CHRFAM7AQ494W8 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.02■■□□□ 1.12
CHRFAM7AQ494W8 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CHRFAM7AQ494W8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
CHRFAM7AQ494W8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC22.02■■□□□ 1.12
CHRFAM7AQ494W8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
CHRFAM7AQ494W8 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.01■■□□□ 1.11
CHRFAM7AQ494W8 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CHRFAM7AQ494W8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22■■□□□ 1.11
CHRFAM7AQ494W8 DRD5P2-201ENST00000421395 2012 ntBASIC22■■□□□ 1.11
CHRFAM7AQ494W8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CHRFAM7AQ494W8 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHRFAM7AQ494W8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHRFAM7AQ494W8 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CHRFAM7AQ494W8 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHRFAM7AQ494W8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CHRFAM7AQ494W8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.98■■□□□ 1.11
CHRFAM7AQ494W8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHRFAM7AQ494W8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHRFAM7AQ494W8 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CHRFAM7AQ494W8 MIR6090-201ENST00000622481 60 ntBASIC21.98■■□□□ 1.11
CHRFAM7AQ494W8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CHRFAM7AQ494W8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CHRFAM7AQ494W8 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CHRFAM7AQ494W8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
CHRFAM7AQ494W8 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
CHRFAM7AQ494W8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CHRFAM7AQ494W8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.96■■□□□ 1.11
CHRFAM7AQ494W8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CHRFAM7AQ494W8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.95■■□□□ 1.1
CHRFAM7AQ494W8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CHRFAM7AQ494W8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms