Protein–RNA interactions for Protein: P55774

CCL18, C-C motif chemokine 18, humanhuman

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL18P55774 MIR3648-1-201ENST00000615959 180 ntBASIC17.93■□□□□ 0.46
CCL18P55774 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCL18P55774 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC17.92■□□□□ 0.46
CCL18P55774 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC17.92■□□□□ 0.46
CCL18P55774 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC17.92■□□□□ 0.46
CCL18P55774 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCL18P55774 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCL18P55774 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC17.92■□□□□ 0.46
CCL18P55774 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCL18P55774 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCL18P55774 LINC00273-201ENST00000539813 1452 ntBASIC17.91■□□□□ 0.46
CCL18P55774 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCL18P55774 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCL18P55774 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCL18P55774 AC016575.1-201ENST00000607026 382 ntBASIC17.9■□□□□ 0.46
CCL18P55774 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCL18P55774 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CCL18P55774 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCL18P55774 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCL18P55774 MIR639-201ENST00000384974 98 ntBASIC17.89■□□□□ 0.45
CCL18P55774 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCL18P55774 DUX4L13-201ENST00000554103 1267 ntBASIC17.89■□□□□ 0.45
CCL18P55774 DUX4L15-201ENST00000611059 1267 ntBASIC17.89■□□□□ 0.45
CCL18P55774 DUX4L23-201ENST00000615195 1269 ntBASIC17.89■□□□□ 0.45
CCL18P55774 DUX4L24-201ENST00000617576 1269 ntBASIC17.89■□□□□ 0.45
CCL18P55774 DUX4L22-201ENST00000618238 1269 ntBASIC17.89■□□□□ 0.45
CCL18P55774 DUX4L20-201ENST00000619712 1269 ntBASIC17.89■□□□□ 0.45
CCL18P55774 DUX4L21-201ENST00000622058 1269 ntBASIC17.89■□□□□ 0.45
CCL18P55774 DUX4L10-201ENST00000622460 1267 ntBASIC17.89■□□□□ 0.45
CCL18P55774 DUX4L25-201ENST00000624915 1269 ntBASIC17.89■□□□□ 0.45
CCL18P55774 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCL18P55774 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC17.88■□□□□ 0.45
CCL18P55774 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC17.88■□□□□ 0.45
CCL18P55774 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCL18P55774 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC17.88■□□□□ 0.45
CCL18P55774 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCL18P55774 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCL18P55774 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCL18P55774 CHML-204ENST00000638121 920 ntTSL 2 BASIC17.87■□□□□ 0.45
CCL18P55774 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC17.87■□□□□ 0.45
CCL18P55774 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCL18P55774 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL18P55774 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCL18P55774 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL18P55774 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL18P55774 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC17.86■□□□□ 0.45
CCL18P55774 CR559946.2-201ENST00000623684 991 ntBASIC17.86■□□□□ 0.45
CCL18P55774 AC127502.1-201ENST00000399971 1502 ntBASIC17.86■□□□□ 0.45
CCL18P55774 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL18P55774 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL18P55774 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL18P55774 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCL18P55774 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCL18P55774 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCL18P55774 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CCL18P55774 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCL18P55774 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCL18P55774 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCL18P55774 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCL18P55774 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCL18P55774 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCL18P55774 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.84■□□□□ 0.45
CCL18P55774 HES6-205ENST00000409356 528 ntTSL 2 BASIC17.83■□□□□ 0.44
CCL18P55774 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCL18P55774 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCL18P55774 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.82■□□□□ 0.44
CCL18P55774 MIR4449-201ENST00000578365 66 ntBASIC17.82■□□□□ 0.44
CCL18P55774 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CCL18P55774 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
CCL18P55774 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCL18P55774 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
CCL18P55774 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CCL18P55774 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CCL18P55774 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCL18P55774 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC17.8■□□□□ 0.44
CCL18P55774 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CCL18P55774 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.8■□□□□ 0.44
CCL18P55774 CHST11-202ENST00000546689 756 ntTSL 2 BASIC17.8■□□□□ 0.44
CCL18P55774 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCL18P55774 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC17.79■□□□□ 0.44
CCL18P55774 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCL18P55774 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CCL18P55774 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCL18P55774 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCL18P55774 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCL18P55774 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC17.78■□□□□ 0.44
CCL18P55774 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCL18P55774 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCL18P55774 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CCL18P55774 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
CCL18P55774 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC17.78■□□□□ 0.44
CCL18P55774 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
CCL18P55774 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CCL18P55774 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CCL18P55774 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC17.77■□□□□ 0.43
CCL18P55774 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCL18P55774 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC17.76■□□□□ 0.43
CCL18P55774 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CCL18P55774 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CCL18P55774 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms