Protein–RNA interactions for Protein: P51608

MECP2, Methyl-CpG-binding protein 2, humanhuman

Known RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2P51608 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MECP2P51608 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.77■■□□□ 1.08
MECP2P51608 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MECP2P51608 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.77■■□□□ 1.08
MECP2P51608 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
MECP2P51608 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.77■■□□□ 1.08
MECP2P51608 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
MECP2P51608 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MECP2P51608 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MECP2P51608 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.76■■□□□ 1.07
MECP2P51608 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC21.76■■□□□ 1.07
MECP2P51608 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
MECP2P51608 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MECP2P51608 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MECP2P51608 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.74■■□□□ 1.07
MECP2P51608 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MECP2P51608 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
MECP2P51608 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.74■■□□□ 1.07
MECP2P51608 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MECP2P51608 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MECP2P51608 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MECP2P51608 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
MECP2P51608 EBPL-203ENST00000378270 579 ntTSL 2 BASIC21.72■■□□□ 1.07
MECP2P51608 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MECP2P51608 AL031258.1-201ENST00000623562 325 ntBASIC21.72■■□□□ 1.07
MECP2P51608 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MECP2P51608 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
MECP2P51608 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
MECP2P51608 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.71■■□□□ 1.07
MECP2P51608 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MECP2P51608 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.71■■□□□ 1.07
MECP2P51608 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.71■■□□□ 1.07
MECP2P51608 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MECP2P51608 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MECP2P51608 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
MECP2P51608 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MECP2P51608 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MECP2P51608 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MECP2P51608 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MECP2P51608 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.69■■□□□ 1.06
MECP2P51608 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
MECP2P51608 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
MECP2P51608 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
MECP2P51608 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MECP2P51608 LINC01003-201ENST00000564834 1764 ntBASIC21.68■■□□□ 1.06
MECP2P51608 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MECP2P51608 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MECP2P51608 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.68■■□□□ 1.06
MECP2P51608 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
MECP2P51608 SNAI3-AS1-204ENST00000567997 2048 ntBASIC21.67■■□□□ 1.06
MECP2P51608 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
MECP2P51608 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
MECP2P51608 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MECP2P51608 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
MECP2P51608 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.66■■□□□ 1.06
MECP2P51608 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
MECP2P51608 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
MECP2P51608 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MECP2P51608 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
MECP2P51608 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MECP2P51608 AC091060.1-201ENST00000623524 1766 ntBASIC21.65■■□□□ 1.06
MECP2P51608 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
MECP2P51608 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.65■■□□□ 1.06
MECP2P51608 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
MECP2P51608 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.64■■□□□ 1.05
MECP2P51608 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.64■■□□□ 1.05
MECP2P51608 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC21.64■■□□□ 1.05
MECP2P51608 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
MECP2P51608 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.63■■□□□ 1.05
MECP2P51608 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
MECP2P51608 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
MECP2P51608 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.62■■□□□ 1.05
MECP2P51608 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
MECP2P51608 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.61■■□□□ 1.05
MECP2P51608 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
MECP2P51608 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.61■■□□□ 1.05
MECP2P51608 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
MECP2P51608 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.61■■□□□ 1.05
MECP2P51608 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
MECP2P51608 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MECP2P51608 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MECP2P51608 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MECP2P51608 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
MECP2P51608 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
MECP2P51608 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
MECP2P51608 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
MECP2P51608 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MECP2P51608 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
MECP2P51608 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MECP2P51608 AP004833.2-201ENST00000532228 1454 ntBASIC21.58■■□□□ 1.05
MECP2P51608 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
MECP2P51608 AC020928.2-201ENST00000588717 2197 ntBASIC21.57■■□□□ 1.04
MECP2P51608 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MECP2P51608 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MECP2P51608 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.57■■□□□ 1.04
MECP2P51608 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
MECP2P51608 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MECP2P51608 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.56■■□□□ 1.04
MECP2P51608 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MECP2P51608 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms