Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
PDE6BP35913 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
PDE6BP35913 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
PDE6BP35913 CHST11-203ENST00000547956 936 ntTSL 2 BASIC32.34■■■□□ 2.77
PDE6BP35913 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC32.34■■■□□ 2.77
PDE6BP35913 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
PDE6BP35913 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC32.33■■■□□ 2.77
PDE6BP35913 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC32.33■■■□□ 2.77
PDE6BP35913 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
PDE6BP35913 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
PDE6BP35913 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
PDE6BP35913 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC32.32■■■□□ 2.77
PDE6BP35913 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC32.32■■■□□ 2.76
PDE6BP35913 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC32.31■■■□□ 2.76
PDE6BP35913 AL033527.3-201ENST00000566366 1196 ntBASIC32.31■■■□□ 2.76
PDE6BP35913 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC32.3■■■□□ 2.76
PDE6BP35913 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC32.3■■■□□ 2.76
PDE6BP35913 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
PDE6BP35913 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
PDE6BP35913 AC135983.2-203ENST00000454486 1613 ntBASIC32.29■■■□□ 2.76
PDE6BP35913 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC32.29■■■□□ 2.76
PDE6BP35913 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
PDE6BP35913 U85056.1-201ENST00000616429 682 ntBASIC32.27■■■□□ 2.76
PDE6BP35913 WHAMMP2-203ENST00000563942 1603 ntBASIC32.26■■■□□ 2.76
PDE6BP35913 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC32.26■■■□□ 2.75
PDE6BP35913 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC32.26■■■□□ 2.75
PDE6BP35913 AC018358.1-201ENST00000631079 1402 ntBASIC32.26■■■□□ 2.75
PDE6BP35913 HYI-213ENST00000583037 1322 ntTSL 5 BASIC32.26■■■□□ 2.75
PDE6BP35913 AC060814.1-201ENST00000554326 538 ntBASIC32.25■■■□□ 2.75
PDE6BP35913 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
PDE6BP35913 AC127502.1-201ENST00000399971 1502 ntBASIC32.24■■■□□ 2.75
PDE6BP35913 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
PDE6BP35913 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC32.24■■■□□ 2.75
PDE6BP35913 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
PDE6BP35913 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC32.23■■■□□ 2.75
PDE6BP35913 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC32.23■■■□□ 2.75
PDE6BP35913 AC148477.6-201ENST00000623746 465 ntBASIC32.23■■■□□ 2.75
PDE6BP35913 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
PDE6BP35913 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC32.21■■■□□ 2.75
PDE6BP35913 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC32.21■■■□□ 2.75
PDE6BP35913 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC32.2■■■□□ 2.75
PDE6BP35913 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
PDE6BP35913 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC32.19■■■□□ 2.74
PDE6BP35913 AC110285.7-201ENST00000624417 1536 ntBASIC32.19■■■□□ 2.74
PDE6BP35913 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
PDE6BP35913 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC32.17■■■□□ 2.74
PDE6BP35913 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC32.17■■■□□ 2.74
PDE6BP35913 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC32.16■■■□□ 2.74
PDE6BP35913 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
PDE6BP35913 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC32.16■■■□□ 2.74
PDE6BP35913 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC32.15■■■□□ 2.74
PDE6BP35913 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC32.15■■■□□ 2.74
PDE6BP35913 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC32.15■■■□□ 2.74
PDE6BP35913 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
PDE6BP35913 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC32.14■■■□□ 2.74
PDE6BP35913 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC32.14■■■□□ 2.74
PDE6BP35913 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC32.14■■■□□ 2.74
PDE6BP35913 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
PDE6BP35913 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC32.12■■■□□ 2.73
PDE6BP35913 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
PDE6BP35913 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
PDE6BP35913 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
PDE6BP35913 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
PDE6BP35913 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC32.1■■■□□ 2.73
PDE6BP35913 TSPY13P-201ENST00000338964 914 ntBASIC32.1■■■□□ 2.73
PDE6BP35913 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
PDE6BP35913 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC32.1■■■□□ 2.73
PDE6BP35913 RPS2-210ENST00000530225 765 ntTSL 2 BASIC32.09■■■□□ 2.73
PDE6BP35913 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC32.08■■■□□ 2.73
PDE6BP35913 AC092296.2-201ENST00000589470 999 ntBASIC32.08■■■□□ 2.73
PDE6BP35913 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC32.07■■■□□ 2.73
PDE6BP35913 KRT18P60-201ENST00000312876 1297 ntBASIC32.07■■■□□ 2.72
PDE6BP35913 GFER-205ENST00000569451 517 ntTSL 5 BASIC32.07■■■□□ 2.72
PDE6BP35913 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC32.07■■■□□ 2.72
PDE6BP35913 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
PDE6BP35913 AC004987.1-201ENST00000428627 508 ntBASIC32.06■■■□□ 2.72
PDE6BP35913 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC32.06■■■□□ 2.72
PDE6BP35913 MIR219A2-201ENST00000608502 1504 ntBASIC32.05■■■□□ 2.72
PDE6BP35913 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
PDE6BP35913 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC32.05■■■□□ 2.72
PDE6BP35913 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
PDE6BP35913 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
PDE6BP35913 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
PDE6BP35913 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
PDE6BP35913 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
PDE6BP35913 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
PDE6BP35913 ATP5G2P3-201ENST00000429083 425 ntBASIC32.03■■■□□ 2.72
PDE6BP35913 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
PDE6BP35913 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC32.03■■■□□ 2.72
PDE6BP35913 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC32.02■■■□□ 2.72
PDE6BP35913 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
PDE6BP35913 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
PDE6BP35913 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC32.01■■■□□ 2.71
PDE6BP35913 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
PDE6BP35913 ECEL1P2-201ENST00000461596 1295 ntBASIC32.01■■■□□ 2.71
PDE6BP35913 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC32.01■■■□□ 2.71
PDE6BP35913 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC32■■■□□ 2.71
PDE6BP35913 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
PDE6BP35913 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC31.99■■■□□ 2.71
PDE6BP35913 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms