Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
GABRA3P34903 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
GABRA3P34903 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
GABRA3P34903 LINC00273-201ENST00000539813 1452 ntBASIC23.83■■□□□ 1.41
GABRA3P34903 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
GABRA3P34903 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
GABRA3P34903 AC135983.2-203ENST00000454486 1613 ntBASIC23.83■■□□□ 1.41
GABRA3P34903 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
GABRA3P34903 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.83■■□□□ 1.4
GABRA3P34903 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
GABRA3P34903 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
GABRA3P34903 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
GABRA3P34903 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
GABRA3P34903 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.81■■□□□ 1.4
GABRA3P34903 DUX4L29-201ENST00000425409 679 ntBASIC23.81■■□□□ 1.4
GABRA3P34903 AC021231.2-201ENST00000594613 730 ntBASIC23.81■■□□□ 1.4
GABRA3P34903 AC100797.4-201ENST00000631653 1827 ntBASIC23.81■■□□□ 1.4
GABRA3P34903 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.81■■□□□ 1.4
GABRA3P34903 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
GABRA3P34903 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
GABRA3P34903 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
GABRA3P34903 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
GABRA3P34903 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.8■■□□□ 1.4
GABRA3P34903 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.8■■□□□ 1.4
GABRA3P34903 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
GABRA3P34903 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
GABRA3P34903 WHAMMP2-203ENST00000563942 1603 ntBASIC23.8■■□□□ 1.4
GABRA3P34903 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.8■■□□□ 1.4
GABRA3P34903 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
GABRA3P34903 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
GABRA3P34903 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
GABRA3P34903 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
GABRA3P34903 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
GABRA3P34903 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
GABRA3P34903 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
GABRA3P34903 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
GABRA3P34903 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.77■■□□□ 1.4
GABRA3P34903 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.77■■□□□ 1.4
GABRA3P34903 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
GABRA3P34903 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GABRA3P34903 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GABRA3P34903 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.76■■□□□ 1.39
GABRA3P34903 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GABRA3P34903 AC142086.6-201ENST00000621154 1765 ntBASIC23.76■■□□□ 1.39
GABRA3P34903 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
GABRA3P34903 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.76■■□□□ 1.39
GABRA3P34903 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.76■■□□□ 1.39
GABRA3P34903 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
GABRA3P34903 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.76■■□□□ 1.39
GABRA3P34903 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
GABRA3P34903 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
GABRA3P34903 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
GABRA3P34903 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.75■■□□□ 1.39
GABRA3P34903 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
GABRA3P34903 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
GABRA3P34903 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
GABRA3P34903 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
GABRA3P34903 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.75■■□□□ 1.39
GABRA3P34903 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
GABRA3P34903 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
GABRA3P34903 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.74■■□□□ 1.39
GABRA3P34903 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.73■■□□□ 1.39
GABRA3P34903 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
GABRA3P34903 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.73■■□□□ 1.39
GABRA3P34903 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.73■■□□□ 1.39
GABRA3P34903 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.73■■□□□ 1.39
GABRA3P34903 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
GABRA3P34903 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.72■■□□□ 1.39
GABRA3P34903 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
GABRA3P34903 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
GABRA3P34903 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.72■■□□□ 1.39
GABRA3P34903 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.72■■□□□ 1.39
GABRA3P34903 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.71■■□□□ 1.39
GABRA3P34903 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.71■■□□□ 1.39
GABRA3P34903 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.71■■□□□ 1.39
GABRA3P34903 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
GABRA3P34903 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
GABRA3P34903 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.7■■□□□ 1.38
GABRA3P34903 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.7■■□□□ 1.38
GABRA3P34903 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.7■■□□□ 1.38
GABRA3P34903 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.7■■□□□ 1.38
GABRA3P34903 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
GABRA3P34903 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
GABRA3P34903 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.69■■□□□ 1.38
GABRA3P34903 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
GABRA3P34903 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
GABRA3P34903 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
GABRA3P34903 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
GABRA3P34903 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.67■■□□□ 1.38
GABRA3P34903 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
GABRA3P34903 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
GABRA3P34903 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
GABRA3P34903 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.65■■□□□ 1.38
GABRA3P34903 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.65■■□□□ 1.38
GABRA3P34903 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
GABRA3P34903 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
GABRA3P34903 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
GABRA3P34903 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
GABRA3P34903 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
GABRA3P34903 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms