Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
LINGO3P0C6S8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
LINGO3P0C6S8 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
LINGO3P0C6S8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
LINGO3P0C6S8 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.58■■□□□ 1.53
LINGO3P0C6S8 AL391121.1-201ENST00000607967 1349 ntBASIC24.58■■□□□ 1.52
LINGO3P0C6S8 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
LINGO3P0C6S8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
LINGO3P0C6S8 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC24.57■■□□□ 1.52
LINGO3P0C6S8 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.56■■□□□ 1.52
LINGO3P0C6S8 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC24.56■■□□□ 1.52
LINGO3P0C6S8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
LINGO3P0C6S8 DRD5P2-201ENST00000421395 2012 ntBASIC24.56■■□□□ 1.52
LINGO3P0C6S8 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
LINGO3P0C6S8 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
LINGO3P0C6S8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
LINGO3P0C6S8 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.54■■□□□ 1.52
LINGO3P0C6S8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
LINGO3P0C6S8 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
LINGO3P0C6S8 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
LINGO3P0C6S8 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
LINGO3P0C6S8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
LINGO3P0C6S8 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.53■■□□□ 1.52
LINGO3P0C6S8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC24.53■■□□□ 1.52
LINGO3P0C6S8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
LINGO3P0C6S8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
LINGO3P0C6S8 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC24.52■■□□□ 1.52
LINGO3P0C6S8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
LINGO3P0C6S8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
LINGO3P0C6S8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC24.51■■□□□ 1.51
LINGO3P0C6S8 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC24.51■■□□□ 1.51
LINGO3P0C6S8 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
LINGO3P0C6S8 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.51■■□□□ 1.51
LINGO3P0C6S8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
LINGO3P0C6S8 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.51■■□□□ 1.51
LINGO3P0C6S8 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
LINGO3P0C6S8 AC093323.1-202ENST00000635031 2045 ntBASIC24.5■■□□□ 1.51
LINGO3P0C6S8 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
LINGO3P0C6S8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
LINGO3P0C6S8 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
LINGO3P0C6S8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
LINGO3P0C6S8 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
LINGO3P0C6S8 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
LINGO3P0C6S8 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC24.48■■□□□ 1.51
LINGO3P0C6S8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LINGO3P0C6S8 EBPL-202ENST00000378268 680 ntTSL 3 BASIC24.47■■□□□ 1.51
LINGO3P0C6S8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC24.46■■□□□ 1.51
LINGO3P0C6S8 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC24.46■■□□□ 1.51
LINGO3P0C6S8 SUZ12P1-203ENST00000578195 985 ntBASIC24.46■■□□□ 1.51
LINGO3P0C6S8 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.51
LINGO3P0C6S8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.44■■□□□ 1.5
LINGO3P0C6S8 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LINGO3P0C6S8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LINGO3P0C6S8 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LINGO3P0C6S8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC24.44■■□□□ 1.5
LINGO3P0C6S8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LINGO3P0C6S8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC24.43■■□□□ 1.5
LINGO3P0C6S8 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
LINGO3P0C6S8 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
LINGO3P0C6S8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LINGO3P0C6S8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
LINGO3P0C6S8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
LINGO3P0C6S8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
LINGO3P0C6S8 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.41■■□□□ 1.5
LINGO3P0C6S8 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LINGO3P0C6S8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LINGO3P0C6S8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LINGO3P0C6S8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
LINGO3P0C6S8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC24.4■■□□□ 1.5
LINGO3P0C6S8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
LINGO3P0C6S8 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.4■■□□□ 1.5
LINGO3P0C6S8 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
LINGO3P0C6S8 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
LINGO3P0C6S8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LINGO3P0C6S8 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.38■■□□□ 1.49
LINGO3P0C6S8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
LINGO3P0C6S8 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
LINGO3P0C6S8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
LINGO3P0C6S8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
LINGO3P0C6S8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC24.37■■□□□ 1.49
LINGO3P0C6S8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.37■■□□□ 1.49
LINGO3P0C6S8 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LINGO3P0C6S8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
LINGO3P0C6S8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LINGO3P0C6S8 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LINGO3P0C6S8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC24.35■■□□□ 1.49
LINGO3P0C6S8 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC24.35■■□□□ 1.49
LINGO3P0C6S8 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
LINGO3P0C6S8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC24.34■■□□□ 1.49
LINGO3P0C6S8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LINGO3P0C6S8 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LINGO3P0C6S8 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
LINGO3P0C6S8 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
LINGO3P0C6S8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
LINGO3P0C6S8 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
LINGO3P0C6S8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
LINGO3P0C6S8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
LINGO3P0C6S8 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
LINGO3P0C6S8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.31■■□□□ 1.48
LINGO3P0C6S8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms