Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
TCRAP04437 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRAP04437 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRAP04437 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRAP04437 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.46■□□□□ 0.71
TCRAP04437 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRAP04437 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TCRAP04437 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.45■□□□□ 0.7
TCRAP04437 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRAP04437 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
TCRAP04437 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRAP04437 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TCRAP04437 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRAP04437 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
TCRAP04437 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TCRAP04437 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
TCRAP04437 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TCRAP04437 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCRAP04437 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCRAP04437 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCRAP04437 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TCRAP04437 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCRAP04437 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
TCRAP04437 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCRAP04437 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TCRAP04437 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
TCRAP04437 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.43■□□□□ 0.7
TCRAP04437 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TCRAP04437 AC135731.1-201ENST00000569415 2548 ntBASIC19.43■□□□□ 0.7
TCRAP04437 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TCRAP04437 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TCRAP04437 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TCRAP04437 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TCRAP04437 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.42■□□□□ 0.7
TCRAP04437 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TCRAP04437 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TCRAP04437 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TCRAP04437 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.41■□□□□ 0.7
TCRAP04437 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TCRAP04437 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TCRAP04437 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
TCRAP04437 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.41■□□□□ 0.7
TCRAP04437 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCRAP04437 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCRAP04437 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
TCRAP04437 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRAP04437 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRAP04437 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.39■□□□□ 0.69
TCRAP04437 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRAP04437 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRAP04437 AC127502.1-201ENST00000399971 1502 ntBASIC19.38■□□□□ 0.69
TCRAP04437 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRAP04437 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.37■□□□□ 0.69
TCRAP04437 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.37■□□□□ 0.69
TCRAP04437 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRAP04437 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC19.37■□□□□ 0.69
TCRAP04437 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.36■□□□□ 0.69
TCRAP04437 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TCRAP04437 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRAP04437 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.35■□□□□ 0.69
TCRAP04437 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRAP04437 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRAP04437 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRAP04437 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TCRAP04437 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.35■□□□□ 0.69
TCRAP04437 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRAP04437 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.34■□□□□ 0.69
TCRAP04437 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TCRAP04437 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TCRAP04437 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.34■□□□□ 0.69
TCRAP04437 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRAP04437 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRAP04437 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TCRAP04437 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TCRAP04437 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TCRAP04437 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC19.33■□□□□ 0.68
TCRAP04437 AL449106.1-201ENST00000608517 1980 ntBASIC19.33■□□□□ 0.68
TCRAP04437 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.32■□□□□ 0.68
TCRAP04437 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TCRAP04437 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.32■□□□□ 0.68
TCRAP04437 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.32■□□□□ 0.68
TCRAP04437 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRAP04437 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TCRAP04437 AC100797.4-201ENST00000631653 1827 ntBASIC19.31■□□□□ 0.68
TCRAP04437 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC19.31■□□□□ 0.68
TCRAP04437 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TCRAP04437 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TCRAP04437 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRAP04437 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRAP04437 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TCRAP04437 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TCRAP04437 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TCRAP04437 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TCRAP04437 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TCRAP04437 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TCRAP04437 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TCRAP04437 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TCRAP04437 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.28■□□□□ 0.68
TCRAP04437 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TCRAP04437 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms