Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PRAMEF11O60813 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.23■■□□□ 1.79
PRAMEF11O60813 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
PRAMEF11O60813 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PRAMEF11O60813 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
PRAMEF11O60813 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
PRAMEF11O60813 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.22■■□□□ 1.79
PRAMEF11O60813 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.22■■□□□ 1.79
PRAMEF11O60813 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PRAMEF11O60813 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PRAMEF11O60813 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PRAMEF11O60813 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
PRAMEF11O60813 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PRAMEF11O60813 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
PRAMEF11O60813 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
PRAMEF11O60813 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.19■■□□□ 1.78
PRAMEF11O60813 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PRAMEF11O60813 MEST-211ENST00000437945 1455 ntTSL 5 BASIC26.18■■□□□ 1.78
PRAMEF11O60813 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PRAMEF11O60813 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
PRAMEF11O60813 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.18■■□□□ 1.78
PRAMEF11O60813 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PRAMEF11O60813 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.17■■□□□ 1.78
PRAMEF11O60813 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PRAMEF11O60813 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PRAMEF11O60813 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.17■■□□□ 1.78
PRAMEF11O60813 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
PRAMEF11O60813 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.16■■□□□ 1.78
PRAMEF11O60813 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PRAMEF11O60813 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.16■■□□□ 1.78
PRAMEF11O60813 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
PRAMEF11O60813 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.15■■□□□ 1.78
PRAMEF11O60813 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
PRAMEF11O60813 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.14■■□□□ 1.78
PRAMEF11O60813 DUX4L11-201ENST00000611504 1267 ntBASIC26.14■■□□□ 1.78
PRAMEF11O60813 MIR7108-201ENST00000614319 87 ntBASIC26.14■■□□□ 1.78
PRAMEF11O60813 DUX4L12-201ENST00000614593 1267 ntBASIC26.14■■□□□ 1.78
PRAMEF11O60813 DUX4L14-201ENST00000621227 1267 ntBASIC26.14■■□□□ 1.78
PRAMEF11O60813 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC26.14■■□□□ 1.78
PRAMEF11O60813 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.14■■□□□ 1.77
PRAMEF11O60813 AC100797.4-201ENST00000631653 1827 ntBASIC26.14■■□□□ 1.77
PRAMEF11O60813 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC26.13■■□□□ 1.77
PRAMEF11O60813 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.13■■□□□ 1.77
PRAMEF11O60813 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.13■■□□□ 1.77
PRAMEF11O60813 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.12■■□□□ 1.77
PRAMEF11O60813 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.12■■□□□ 1.77
PRAMEF11O60813 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PRAMEF11O60813 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PRAMEF11O60813 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PRAMEF11O60813 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PRAMEF11O60813 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.1■■□□□ 1.77
PRAMEF11O60813 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PRAMEF11O60813 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
PRAMEF11O60813 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PRAMEF11O60813 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PRAMEF11O60813 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PRAMEF11O60813 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PRAMEF11O60813 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC26.09■■□□□ 1.77
PRAMEF11O60813 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.09■■□□□ 1.77
PRAMEF11O60813 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.08■■□□□ 1.77
PRAMEF11O60813 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.08■■□□□ 1.77
PRAMEF11O60813 DUX4L13-201ENST00000554103 1267 ntBASIC26.08■■□□□ 1.77
PRAMEF11O60813 DUX4L15-201ENST00000611059 1267 ntBASIC26.08■■□□□ 1.77
PRAMEF11O60813 DUX4L23-201ENST00000615195 1269 ntBASIC26.08■■□□□ 1.77
PRAMEF11O60813 DUX4L24-201ENST00000617576 1269 ntBASIC26.08■■□□□ 1.77
PRAMEF11O60813 DUX4L22-201ENST00000618238 1269 ntBASIC26.08■■□□□ 1.77
PRAMEF11O60813 DUX4L20-201ENST00000619712 1269 ntBASIC26.08■■□□□ 1.77
PRAMEF11O60813 DUX4L21-201ENST00000622058 1269 ntBASIC26.08■■□□□ 1.77
PRAMEF11O60813 DUX4L10-201ENST00000622460 1267 ntBASIC26.08■■□□□ 1.77
PRAMEF11O60813 DUX4L25-201ENST00000624915 1269 ntBASIC26.08■■□□□ 1.77
PRAMEF11O60813 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
PRAMEF11O60813 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.08■■□□□ 1.77
PRAMEF11O60813 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
PRAMEF11O60813 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PRAMEF11O60813 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC26.07■■□□□ 1.76
PRAMEF11O60813 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PRAMEF11O60813 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.07■■□□□ 1.76
PRAMEF11O60813 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PRAMEF11O60813 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC26.05■■□□□ 1.76
PRAMEF11O60813 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PRAMEF11O60813 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PRAMEF11O60813 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
PRAMEF11O60813 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PRAMEF11O60813 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PRAMEF11O60813 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.03■■□□□ 1.76
PRAMEF11O60813 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PRAMEF11O60813 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PRAMEF11O60813 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PRAMEF11O60813 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PRAMEF11O60813 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PRAMEF11O60813 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.02■■□□□ 1.76
PRAMEF11O60813 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PRAMEF11O60813 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PRAMEF11O60813 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.01■■□□□ 1.75
PRAMEF11O60813 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.01■■□□□ 1.75
PRAMEF11O60813 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.01■■□□□ 1.75
PRAMEF11O60813 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
PRAMEF11O60813 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.01■■□□□ 1.75
PRAMEF11O60813 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26■■□□□ 1.75
PRAMEF11O60813 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms