Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RTL8CO15255 AC010864.1-201ENST00000609407 1511 ntBASIC17.27■□□□□ 0.36
RTL8CO15255 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RTL8CO15255 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
RTL8CO15255 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTL8CO15255 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
RTL8CO15255 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
RTL8CO15255 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RTL8CO15255 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC17.26■□□□□ 0.35
RTL8CO15255 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
RTL8CO15255 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RTL8CO15255 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTL8CO15255 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTL8CO15255 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.25■□□□□ 0.35
RTL8CO15255 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RTL8CO15255 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.25■□□□□ 0.35
RTL8CO15255 U85056.1-201ENST00000616429 682 ntBASIC17.25■□□□□ 0.35
RTL8CO15255 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTL8CO15255 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.25■□□□□ 0.35
RTL8CO15255 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RTL8CO15255 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTL8CO15255 AC018358.1-201ENST00000631079 1402 ntBASIC17.24■□□□□ 0.35
RTL8CO15255 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RTL8CO15255 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTL8CO15255 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RTL8CO15255 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RTL8CO15255 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RTL8CO15255 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.22■□□□□ 0.35
RTL8CO15255 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
RTL8CO15255 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RTL8CO15255 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.22■□□□□ 0.35
RTL8CO15255 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTL8CO15255 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RTL8CO15255 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RTL8CO15255 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
RTL8CO15255 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RTL8CO15255 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
RTL8CO15255 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC17.2■□□□□ 0.34
RTL8CO15255 AC060814.1-201ENST00000554326 538 ntBASIC17.2■□□□□ 0.34
RTL8CO15255 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC17.2■□□□□ 0.34
RTL8CO15255 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTL8CO15255 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC17.19■□□□□ 0.34
RTL8CO15255 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTL8CO15255 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC17.19■□□□□ 0.34
RTL8CO15255 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTL8CO15255 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTL8CO15255 WHAMMP2-203ENST00000563942 1603 ntBASIC17.18■□□□□ 0.34
RTL8CO15255 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTL8CO15255 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.17■□□□□ 0.34
RTL8CO15255 AC135983.2-203ENST00000454486 1613 ntBASIC17.17■□□□□ 0.34
RTL8CO15255 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RTL8CO15255 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC17.16■□□□□ 0.34
RTL8CO15255 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.16■□□□□ 0.34
RTL8CO15255 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC17.16■□□□□ 0.34
RTL8CO15255 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.16■□□□□ 0.34
RTL8CO15255 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC17.16■□□□□ 0.34
RTL8CO15255 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTL8CO15255 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTL8CO15255 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTL8CO15255 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17.15■□□□□ 0.34
RTL8CO15255 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
RTL8CO15255 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTL8CO15255 AC127502.1-201ENST00000399971 1502 ntBASIC17.15■□□□□ 0.34
RTL8CO15255 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
RTL8CO15255 TSPY13P-201ENST00000338964 914 ntBASIC17.14■□□□□ 0.33
RTL8CO15255 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.14■□□□□ 0.33
RTL8CO15255 AC148477.6-201ENST00000623746 465 ntBASIC17.14■□□□□ 0.33
RTL8CO15255 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTL8CO15255 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RTL8CO15255 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RTL8CO15255 KRT18P60-201ENST00000312876 1297 ntBASIC17.13■□□□□ 0.33
RTL8CO15255 AC004987.1-201ENST00000428627 508 ntBASIC17.13■□□□□ 0.33
RTL8CO15255 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RTL8CO15255 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
RTL8CO15255 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RTL8CO15255 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTL8CO15255 AC110285.7-201ENST00000624417 1536 ntBASIC17.12■□□□□ 0.33
RTL8CO15255 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTL8CO15255 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTL8CO15255 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC17.12■□□□□ 0.33
RTL8CO15255 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTL8CO15255 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTL8CO15255 ATP5G2P3-201ENST00000429083 425 ntBASIC17.11■□□□□ 0.33
RTL8CO15255 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC17.11■□□□□ 0.33
RTL8CO15255 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTL8CO15255 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.11■□□□□ 0.33
RTL8CO15255 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTL8CO15255 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RTL8CO15255 AC092296.2-201ENST00000589470 999 ntBASIC17.1■□□□□ 0.33
RTL8CO15255 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTL8CO15255 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTL8CO15255 RARRES2P1-201ENST00000474487 481 ntBASIC17.09■□□□□ 0.33
RTL8CO15255 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTL8CO15255 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RTL8CO15255 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RTL8CO15255 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTL8CO15255 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTL8CO15255 GUK1-208ENST00000366728 842 ntTSL 2 BASIC17.08■□□□□ 0.32
RTL8CO15255 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.08■□□□□ 0.32
RTL8CO15255 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms