Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CASQ2O14958 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CASQ2O14958 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CASQ2O14958 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC24.33■■□□□ 1.49
CASQ2O14958 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.33■■□□□ 1.48
CASQ2O14958 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
CASQ2O14958 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CASQ2O14958 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
CASQ2O14958 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CASQ2O14958 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CASQ2O14958 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CASQ2O14958 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CASQ2O14958 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
CASQ2O14958 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
CASQ2O14958 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
CASQ2O14958 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CASQ2O14958 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.3■■□□□ 1.48
CASQ2O14958 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
CASQ2O14958 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
CASQ2O14958 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
CASQ2O14958 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
CASQ2O14958 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.29■■□□□ 1.48
CASQ2O14958 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CASQ2O14958 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC24.28■■□□□ 1.48
CASQ2O14958 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CASQ2O14958 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CASQ2O14958 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CASQ2O14958 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.28■■□□□ 1.48
CASQ2O14958 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CASQ2O14958 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.27■■□□□ 1.48
CASQ2O14958 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
CASQ2O14958 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CASQ2O14958 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CASQ2O14958 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CASQ2O14958 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.27■■□□□ 1.48
CASQ2O14958 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
CASQ2O14958 SNAI3-AS1-204ENST00000567997 2048 ntBASIC24.26■■□□□ 1.47
CASQ2O14958 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CASQ2O14958 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CASQ2O14958 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.25■■□□□ 1.47
CASQ2O14958 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CASQ2O14958 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.25■■□□□ 1.47
CASQ2O14958 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
CASQ2O14958 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CASQ2O14958 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
CASQ2O14958 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CASQ2O14958 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.25■■□□□ 1.47
CASQ2O14958 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.24■■□□□ 1.47
CASQ2O14958 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
CASQ2O14958 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CASQ2O14958 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.24■■□□□ 1.47
CASQ2O14958 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
CASQ2O14958 LINC01003-201ENST00000564834 1764 ntBASIC24.24■■□□□ 1.47
CASQ2O14958 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CASQ2O14958 AC091060.1-201ENST00000623524 1766 ntBASIC24.23■■□□□ 1.47
CASQ2O14958 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CASQ2O14958 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
CASQ2O14958 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CASQ2O14958 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CASQ2O14958 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.22■■□□□ 1.47
CASQ2O14958 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CASQ2O14958 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CASQ2O14958 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CASQ2O14958 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CASQ2O14958 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC24.21■■□□□ 1.47
CASQ2O14958 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
CASQ2O14958 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC24.2■■□□□ 1.47
CASQ2O14958 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC24.2■■□□□ 1.46
CASQ2O14958 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
CASQ2O14958 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.2■■□□□ 1.46
CASQ2O14958 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.19■■□□□ 1.46
CASQ2O14958 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC24.19■■□□□ 1.46
CASQ2O14958 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CASQ2O14958 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC24.19■■□□□ 1.46
CASQ2O14958 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CASQ2O14958 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
CASQ2O14958 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.18■■□□□ 1.46
CASQ2O14958 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.18■■□□□ 1.46
CASQ2O14958 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CASQ2O14958 AC020928.2-201ENST00000588717 2197 ntBASIC24.17■■□□□ 1.46
CASQ2O14958 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC24.17■■□□□ 1.46
CASQ2O14958 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
CASQ2O14958 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
CASQ2O14958 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
CASQ2O14958 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
CASQ2O14958 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.15■■□□□ 1.46
CASQ2O14958 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
CASQ2O14958 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
CASQ2O14958 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.46
CASQ2O14958 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CASQ2O14958 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
CASQ2O14958 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CASQ2O14958 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
CASQ2O14958 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
CASQ2O14958 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CASQ2O14958 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.12■■□□□ 1.45
CASQ2O14958 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
CASQ2O14958 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CASQ2O14958 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CASQ2O14958 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms