Protein–RNA interactions for Protein: B2RNG4

TRIM6-TRIM34, TRIM6-TRIM34 readthrough, humanhuman

Predictions only

Length 842 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-TRIM34B2RNG4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
TRIM6-TRIM34B2RNG4 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
TRIM6-TRIM34B2RNG4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC31.33■■■□□ 2.61
TRIM6-TRIM34B2RNG4 AC100797.4-201ENST00000631653 1827 ntBASIC31.33■■■□□ 2.61
TRIM6-TRIM34B2RNG4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC31.33■■■□□ 2.61
TRIM6-TRIM34B2RNG4 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC31.32■■■□□ 2.6
TRIM6-TRIM34B2RNG4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
TRIM6-TRIM34B2RNG4 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
TRIM6-TRIM34B2RNG4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC31.31■■■□□ 2.6
TRIM6-TRIM34B2RNG4 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC31.31■■■□□ 2.6
TRIM6-TRIM34B2RNG4 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
TRIM6-TRIM34B2RNG4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC31.3■■■□□ 2.6
TRIM6-TRIM34B2RNG4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC31.3■■■□□ 2.6
TRIM6-TRIM34B2RNG4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
TRIM6-TRIM34B2RNG4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.3■■■□□ 2.6
TRIM6-TRIM34B2RNG4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
TRIM6-TRIM34B2RNG4 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC31.29■■■□□ 2.6
TRIM6-TRIM34B2RNG4 AC135983.2-203ENST00000454486 1613 ntBASIC31.29■■■□□ 2.6
TRIM6-TRIM34B2RNG4 AC142086.6-201ENST00000621154 1765 ntBASIC31.29■■■□□ 2.6
TRIM6-TRIM34B2RNG4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC31.29■■■□□ 2.6
TRIM6-TRIM34B2RNG4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
TRIM6-TRIM34B2RNG4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.28■■■□□ 2.6
TRIM6-TRIM34B2RNG4 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
TRIM6-TRIM34B2RNG4 WHAMMP2-203ENST00000563942 1603 ntBASIC31.27■■■□□ 2.6
TRIM6-TRIM34B2RNG4 LINC00273-201ENST00000539813 1452 ntBASIC31.27■■■□□ 2.6
TRIM6-TRIM34B2RNG4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.27■■■□□ 2.6
TRIM6-TRIM34B2RNG4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
TRIM6-TRIM34B2RNG4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31.27■■■□□ 2.6
TRIM6-TRIM34B2RNG4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
TRIM6-TRIM34B2RNG4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
TRIM6-TRIM34B2RNG4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
TRIM6-TRIM34B2RNG4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.25■■■□□ 2.59
TRIM6-TRIM34B2RNG4 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC31.25■■■□□ 2.59
TRIM6-TRIM34B2RNG4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
TRIM6-TRIM34B2RNG4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
TRIM6-TRIM34B2RNG4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
TRIM6-TRIM34B2RNG4 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC31.24■■■□□ 2.59
TRIM6-TRIM34B2RNG4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
TRIM6-TRIM34B2RNG4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
TRIM6-TRIM34B2RNG4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.23■■■□□ 2.59
TRIM6-TRIM34B2RNG4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
TRIM6-TRIM34B2RNG4 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
TRIM6-TRIM34B2RNG4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC31.22■■■□□ 2.59
TRIM6-TRIM34B2RNG4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
TRIM6-TRIM34B2RNG4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
TRIM6-TRIM34B2RNG4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
TRIM6-TRIM34B2RNG4 AC021231.2-201ENST00000594613 730 ntBASIC31.22■■■□□ 2.59
TRIM6-TRIM34B2RNG4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
TRIM6-TRIM34B2RNG4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC31.21■■■□□ 2.59
TRIM6-TRIM34B2RNG4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
TRIM6-TRIM34B2RNG4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC31.21■■■□□ 2.59
TRIM6-TRIM34B2RNG4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC31.21■■■□□ 2.59
TRIM6-TRIM34B2RNG4 DUX4L29-201ENST00000425409 679 ntBASIC31.2■■■□□ 2.59
TRIM6-TRIM34B2RNG4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.2■■■□□ 2.59
TRIM6-TRIM34B2RNG4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.2■■■□□ 2.59
TRIM6-TRIM34B2RNG4 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC31.19■■■□□ 2.58
TRIM6-TRIM34B2RNG4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
TRIM6-TRIM34B2RNG4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
TRIM6-TRIM34B2RNG4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC31.19■■■□□ 2.58
TRIM6-TRIM34B2RNG4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
TRIM6-TRIM34B2RNG4 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC31.18■■■□□ 2.58
TRIM6-TRIM34B2RNG4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TRIM6-TRIM34B2RNG4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TRIM6-TRIM34B2RNG4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TRIM6-TRIM34B2RNG4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
TRIM6-TRIM34B2RNG4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.18■■■□□ 2.58
TRIM6-TRIM34B2RNG4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
TRIM6-TRIM34B2RNG4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.17■■■□□ 2.58
TRIM6-TRIM34B2RNG4 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC31.17■■■□□ 2.58
TRIM6-TRIM34B2RNG4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
TRIM6-TRIM34B2RNG4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC31.16■■■□□ 2.58
TRIM6-TRIM34B2RNG4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC31.16■■■□□ 2.58
TRIM6-TRIM34B2RNG4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
TRIM6-TRIM34B2RNG4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
TRIM6-TRIM34B2RNG4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
TRIM6-TRIM34B2RNG4 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
TRIM6-TRIM34B2RNG4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
TRIM6-TRIM34B2RNG4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.15■■■□□ 2.58
TRIM6-TRIM34B2RNG4 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC31.15■■■□□ 2.58
TRIM6-TRIM34B2RNG4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
TRIM6-TRIM34B2RNG4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.12■■■□□ 2.57
TRIM6-TRIM34B2RNG4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.12■■■□□ 2.57
TRIM6-TRIM34B2RNG4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
TRIM6-TRIM34B2RNG4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
TRIM6-TRIM34B2RNG4 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
TRIM6-TRIM34B2RNG4 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
TRIM6-TRIM34B2RNG4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.11■■■□□ 2.57
TRIM6-TRIM34B2RNG4 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC31.11■■■□□ 2.57
TRIM6-TRIM34B2RNG4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
TRIM6-TRIM34B2RNG4 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
TRIM6-TRIM34B2RNG4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.1■■■□□ 2.57
TRIM6-TRIM34B2RNG4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.1■■■□□ 2.57
TRIM6-TRIM34B2RNG4 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
TRIM6-TRIM34B2RNG4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
TRIM6-TRIM34B2RNG4 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
TRIM6-TRIM34B2RNG4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC31.09■■■□□ 2.57
TRIM6-TRIM34B2RNG4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
TRIM6-TRIM34B2RNG4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.08■■■□□ 2.57
TRIM6-TRIM34B2RNG4 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
TRIM6-TRIM34B2RNG4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 1652.2 ms