Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 AC135983.2-203ENST00000454486 1613 ntBASIC30.7■■■□□ 2.5
SSC5DA1L4H1 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
SSC5DA1L4H1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
SSC5DA1L4H1 AC008813.1-201ENST00000536597 885 ntBASIC30.68■■■□□ 2.5
SSC5DA1L4H1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.68■■■□□ 2.5
SSC5DA1L4H1 AC127502.1-201ENST00000399971 1502 ntBASIC30.67■■■□□ 2.5
SSC5DA1L4H1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
SSC5DA1L4H1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
SSC5DA1L4H1 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.66■■■□□ 2.5
SSC5DA1L4H1 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.66■■■□□ 2.5
SSC5DA1L4H1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
SSC5DA1L4H1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
SSC5DA1L4H1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
SSC5DA1L4H1 AC060814.1-201ENST00000554326 538 ntBASIC30.62■■■□□ 2.49
SSC5DA1L4H1 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SSC5DA1L4H1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
SSC5DA1L4H1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.62■■■□□ 2.49
SSC5DA1L4H1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.62■■■□□ 2.49
SSC5DA1L4H1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SSC5DA1L4H1 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SSC5DA1L4H1 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SSC5DA1L4H1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC30.6■■■□□ 2.49
SSC5DA1L4H1 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SSC5DA1L4H1 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SSC5DA1L4H1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SSC5DA1L4H1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC30.59■■■□□ 2.49
SSC5DA1L4H1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
SSC5DA1L4H1 U85056.1-201ENST00000616429 682 ntBASIC30.59■■■□□ 2.49
SSC5DA1L4H1 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SSC5DA1L4H1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
SSC5DA1L4H1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC30.59■■■□□ 2.49
SSC5DA1L4H1 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
SSC5DA1L4H1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
SSC5DA1L4H1 AC018358.1-201ENST00000631079 1402 ntBASIC30.58■■■□□ 2.49
SSC5DA1L4H1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
SSC5DA1L4H1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.58■■■□□ 2.49
SSC5DA1L4H1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC30.57■■■□□ 2.48
SSC5DA1L4H1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
SSC5DA1L4H1 AC148477.6-201ENST00000623746 465 ntBASIC30.56■■■□□ 2.48
SSC5DA1L4H1 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SSC5DA1L4H1 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
SSC5DA1L4H1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
SSC5DA1L4H1 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC30.55■■■□□ 2.48
SSC5DA1L4H1 AL033527.3-201ENST00000566366 1196 ntBASIC30.55■■■□□ 2.48
SSC5DA1L4H1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC30.54■■■□□ 2.48
SSC5DA1L4H1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.54■■■□□ 2.48
SSC5DA1L4H1 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
SSC5DA1L4H1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
SSC5DA1L4H1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
SSC5DA1L4H1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC30.52■■■□□ 2.48
SSC5DA1L4H1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC30.52■■■□□ 2.48
SSC5DA1L4H1 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SSC5DA1L4H1 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SSC5DA1L4H1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.47
SSC5DA1L4H1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC30.51■■■□□ 2.47
SSC5DA1L4H1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.51■■■□□ 2.47
SSC5DA1L4H1 AC110285.7-201ENST00000624417 1536 ntBASIC30.5■■■□□ 2.47
SSC5DA1L4H1 GFER-205ENST00000569451 517 ntTSL 5 BASIC30.5■■■□□ 2.47
SSC5DA1L4H1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SSC5DA1L4H1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
SSC5DA1L4H1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
SSC5DA1L4H1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC30.48■■■□□ 2.47
SSC5DA1L4H1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
SSC5DA1L4H1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC30.47■■■□□ 2.47
SSC5DA1L4H1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
SSC5DA1L4H1 AC092296.2-201ENST00000589470 999 ntBASIC30.47■■■□□ 2.47
SSC5DA1L4H1 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
SSC5DA1L4H1 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
SSC5DA1L4H1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.44■■■□□ 2.46
SSC5DA1L4H1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC30.44■■■□□ 2.46
SSC5DA1L4H1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
SSC5DA1L4H1 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SSC5DA1L4H1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
SSC5DA1L4H1 KRT18P60-201ENST00000312876 1297 ntBASIC30.42■■■□□ 2.46
SSC5DA1L4H1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC30.42■■■□□ 2.46
SSC5DA1L4H1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SSC5DA1L4H1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
SSC5DA1L4H1 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
SSC5DA1L4H1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC30.41■■■□□ 2.46
SSC5DA1L4H1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
SSC5DA1L4H1 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SSC5DA1L4H1 MIR219A2-201ENST00000608502 1504 ntBASIC30.4■■■□□ 2.46
SSC5DA1L4H1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC30.4■■■□□ 2.46
SSC5DA1L4H1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SSC5DA1L4H1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC30.4■■■□□ 2.46
SSC5DA1L4H1 PEX7-203ENST00000541292 945 ntTSL 5 BASIC30.4■■■□□ 2.46
SSC5DA1L4H1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SSC5DA1L4H1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SSC5DA1L4H1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC30.39■■■□□ 2.46
SSC5DA1L4H1 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
SSC5DA1L4H1 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SSC5DA1L4H1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
SSC5DA1L4H1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC30.37■■■□□ 2.45
SSC5DA1L4H1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC30.37■■■□□ 2.45
SSC5DA1L4H1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
SSC5DA1L4H1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC30.37■■■□□ 2.45
SSC5DA1L4H1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC30.36■■■□□ 2.45
SSC5DA1L4H1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
SSC5DA1L4H1 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
SSC5DA1L4H1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms