Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC33.45■■■□□ 2.94
LOC102724428A0A0B4J2F2 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC33.44■■■□□ 2.94
LOC102724428A0A0B4J2F2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC33.43■■■□□ 2.94
LOC102724428A0A0B4J2F2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC33.43■■■□□ 2.94
LOC102724428A0A0B4J2F2 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC33.43■■■□□ 2.94
LOC102724428A0A0B4J2F2 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC33.43■■■□□ 2.94
LOC102724428A0A0B4J2F2 AC127502.1-201ENST00000399971 1502 ntBASIC33.43■■■□□ 2.94
LOC102724428A0A0B4J2F2 AC135983.2-203ENST00000454486 1613 ntBASIC33.42■■■□□ 2.94
LOC102724428A0A0B4J2F2 WHAMMP2-203ENST00000563942 1603 ntBASIC33.42■■■□□ 2.94
LOC102724428A0A0B4J2F2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC33.42■■■□□ 2.94
LOC102724428A0A0B4J2F2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
LOC102724428A0A0B4J2F2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
LOC102724428A0A0B4J2F2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC33.39■■■□□ 2.94
LOC102724428A0A0B4J2F2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
LOC102724428A0A0B4J2F2 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
LOC102724428A0A0B4J2F2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
LOC102724428A0A0B4J2F2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC33.37■■■□□ 2.93
LOC102724428A0A0B4J2F2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
LOC102724428A0A0B4J2F2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
LOC102724428A0A0B4J2F2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
LOC102724428A0A0B4J2F2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC33.35■■■□□ 2.93
LOC102724428A0A0B4J2F2 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC33.34■■■□□ 2.93
LOC102724428A0A0B4J2F2 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC33.34■■■□□ 2.93
LOC102724428A0A0B4J2F2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC33.33■■■□□ 2.93
LOC102724428A0A0B4J2F2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC33.33■■■□□ 2.93
LOC102724428A0A0B4J2F2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC33.32■■■□□ 2.93
LOC102724428A0A0B4J2F2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC33.32■■■□□ 2.92
LOC102724428A0A0B4J2F2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
LOC102724428A0A0B4J2F2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC33.32■■■□□ 2.92
LOC102724428A0A0B4J2F2 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
LOC102724428A0A0B4J2F2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
LOC102724428A0A0B4J2F2 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
LOC102724428A0A0B4J2F2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC33.31■■■□□ 2.92
LOC102724428A0A0B4J2F2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
LOC102724428A0A0B4J2F2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC33.3■■■□□ 2.92
LOC102724428A0A0B4J2F2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC33.3■■■□□ 2.92
LOC102724428A0A0B4J2F2 AC060814.1-201ENST00000554326 538 ntBASIC33.3■■■□□ 2.92
LOC102724428A0A0B4J2F2 AL033527.3-201ENST00000566366 1196 ntBASIC33.3■■■□□ 2.92
LOC102724428A0A0B4J2F2 U85056.1-201ENST00000616429 682 ntBASIC33.3■■■□□ 2.92
LOC102724428A0A0B4J2F2 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC33.3■■■□□ 2.92
LOC102724428A0A0B4J2F2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
LOC102724428A0A0B4J2F2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC33.29■■■□□ 2.92
LOC102724428A0A0B4J2F2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
LOC102724428A0A0B4J2F2 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
LOC102724428A0A0B4J2F2 AC018358.1-201ENST00000631079 1402 ntBASIC33.28■■■□□ 2.92
LOC102724428A0A0B4J2F2 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
LOC102724428A0A0B4J2F2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC33.28■■■□□ 2.92
LOC102724428A0A0B4J2F2 AC148477.6-201ENST00000623746 465 ntBASIC33.28■■■□□ 2.92
LOC102724428A0A0B4J2F2 AC110285.7-201ENST00000624417 1536 ntBASIC33.28■■■□□ 2.92
LOC102724428A0A0B4J2F2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC33.27■■■□□ 2.92
LOC102724428A0A0B4J2F2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC33.26■■■□□ 2.91
LOC102724428A0A0B4J2F2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC33.26■■■□□ 2.91
LOC102724428A0A0B4J2F2 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC33.26■■■□□ 2.91
LOC102724428A0A0B4J2F2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC33.26■■■□□ 2.91
LOC102724428A0A0B4J2F2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC33.25■■■□□ 2.91
LOC102724428A0A0B4J2F2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
LOC102724428A0A0B4J2F2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC33.24■■■□□ 2.91
LOC102724428A0A0B4J2F2 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
LOC102724428A0A0B4J2F2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC33.21■■■□□ 2.91
LOC102724428A0A0B4J2F2 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC33.2■■■□□ 2.91
LOC102724428A0A0B4J2F2 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC33.2■■■□□ 2.91
LOC102724428A0A0B4J2F2 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
LOC102724428A0A0B4J2F2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC33.18■■■□□ 2.9
LOC102724428A0A0B4J2F2 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC33.18■■■□□ 2.9
LOC102724428A0A0B4J2F2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC33.17■■■□□ 2.9
LOC102724428A0A0B4J2F2 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
LOC102724428A0A0B4J2F2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC33.16■■■□□ 2.9
LOC102724428A0A0B4J2F2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC33.16■■■□□ 2.9
LOC102724428A0A0B4J2F2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC33.16■■■□□ 2.9
LOC102724428A0A0B4J2F2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
LOC102724428A0A0B4J2F2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
LOC102724428A0A0B4J2F2 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC33.15■■■□□ 2.9
LOC102724428A0A0B4J2F2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
LOC102724428A0A0B4J2F2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC33.14■■■□□ 2.9
LOC102724428A0A0B4J2F2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC33.14■■■□□ 2.9
LOC102724428A0A0B4J2F2 MIR219A2-201ENST00000608502 1504 ntBASIC33.14■■■□□ 2.9
LOC102724428A0A0B4J2F2 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC33.14■■■□□ 2.9
LOC102724428A0A0B4J2F2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
LOC102724428A0A0B4J2F2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
LOC102724428A0A0B4J2F2 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC33.13■■■□□ 2.89
LOC102724428A0A0B4J2F2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC33.13■■■□□ 2.89
LOC102724428A0A0B4J2F2 AC092296.2-201ENST00000589470 999 ntBASIC33.13■■■□□ 2.89
LOC102724428A0A0B4J2F2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC33.13■■■□□ 2.89
LOC102724428A0A0B4J2F2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
LOC102724428A0A0B4J2F2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
LOC102724428A0A0B4J2F2 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC33.12■■■□□ 2.89
LOC102724428A0A0B4J2F2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
LOC102724428A0A0B4J2F2 GFER-205ENST00000569451 517 ntTSL 5 BASIC33.11■■■□□ 2.89
LOC102724428A0A0B4J2F2 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
LOC102724428A0A0B4J2F2 KRT18P60-201ENST00000312876 1297 ntBASIC33.1■■■□□ 2.89
LOC102724428A0A0B4J2F2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC33.1■■■□□ 2.89
LOC102724428A0A0B4J2F2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
LOC102724428A0A0B4J2F2 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
LOC102724428A0A0B4J2F2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
LOC102724428A0A0B4J2F2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
LOC102724428A0A0B4J2F2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC33.08■■■□□ 2.89
LOC102724428A0A0B4J2F2 TSPY13P-201ENST00000338964 914 ntBASIC33.07■■■□□ 2.88
LOC102724428A0A0B4J2F2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
LOC102724428A0A0B4J2F2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
LOC102724428A0A0B4J2F2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC33.06■■■□□ 2.88
Retrieved 100 of 98,524 protein–RNA pairs in 628 ms