Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC14.57□□□□□ -0.08
TRAV22A0A0B4J277 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TRAV22A0A0B4J277 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC14.57□□□□□ -0.08
TRAV22A0A0B4J277 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV22A0A0B4J277 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TRAV22A0A0B4J277 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV22A0A0B4J277 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV22A0A0B4J277 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRAV22A0A0B4J277 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV22A0A0B4J277 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC14.55□□□□□ -0.08
TRAV22A0A0B4J277 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV22A0A0B4J277 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV22A0A0B4J277 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRAV22A0A0B4J277 AL135925.1-201ENST00000605920 1701 ntBASIC14.54□□□□□ -0.08
TRAV22A0A0B4J277 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
TRAV22A0A0B4J277 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC14.54□□□□□ -0.08
TRAV22A0A0B4J277 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TRAV22A0A0B4J277 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV22A0A0B4J277 AC093323.1-202ENST00000635031 2045 ntBASIC14.53□□□□□ -0.08
TRAV22A0A0B4J277 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV22A0A0B4J277 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV22A0A0B4J277 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRAV22A0A0B4J277 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
TRAV22A0A0B4J277 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRAV22A0A0B4J277 SHF-208ENST00000560734 1731 ntTSL 3 BASIC14.52□□□□□ -0.08
TRAV22A0A0B4J277 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRAV22A0A0B4J277 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
TRAV22A0A0B4J277 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
TRAV22A0A0B4J277 AL139393.2-201ENST00000608721 2025 ntBASIC14.52□□□□□ -0.09
TRAV22A0A0B4J277 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRAV22A0A0B4J277 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC14.52□□□□□ -0.09
TRAV22A0A0B4J277 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC14.51□□□□□ -0.09
TRAV22A0A0B4J277 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV22A0A0B4J277 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRAV22A0A0B4J277 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV22A0A0B4J277 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV22A0A0B4J277 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV22A0A0B4J277 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRAV22A0A0B4J277 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV22A0A0B4J277 RARA-203ENST00000394086 2008 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV22A0A0B4J277 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TRAV22A0A0B4J277 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV22A0A0B4J277 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC14.49□□□□□ -0.09
TRAV22A0A0B4J277 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV22A0A0B4J277 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRAV22A0A0B4J277 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV22A0A0B4J277 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV22A0A0B4J277 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRAV22A0A0B4J277 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV22A0A0B4J277 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC14.47□□□□□ -0.09
TRAV22A0A0B4J277 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV22A0A0B4J277 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV22A0A0B4J277 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV22A0A0B4J277 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV22A0A0B4J277 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
TRAV22A0A0B4J277 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV22A0A0B4J277 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV22A0A0B4J277 BX255925.1-201ENST00000566954 1854 ntBASIC14.45□□□□□ -0.1
TRAV22A0A0B4J277 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV22A0A0B4J277 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV22A0A0B4J277 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC14.44□□□□□ -0.1
TRAV22A0A0B4J277 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV22A0A0B4J277 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV22A0A0B4J277 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC14.44□□□□□ -0.1
TRAV22A0A0B4J277 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV22A0A0B4J277 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
TRAV22A0A0B4J277 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV22A0A0B4J277 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
TRAV22A0A0B4J277 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TRAV22A0A0B4J277 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV22A0A0B4J277 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TRAV22A0A0B4J277 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV22A0A0B4J277 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV22A0A0B4J277 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TRAV22A0A0B4J277 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
TRAV22A0A0B4J277 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV22A0A0B4J277 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV22A0A0B4J277 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV22A0A0B4J277 MAPK4-202ENST00000540640 1576 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV22A0A0B4J277 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV22A0A0B4J277 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV22A0A0B4J277 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV22A0A0B4J277 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
TRAV22A0A0B4J277 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV22A0A0B4J277 AC020928.2-201ENST00000588717 2197 ntBASIC14.4□□□□□ -0.1
TRAV22A0A0B4J277 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAV22A0A0B4J277 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRAV22A0A0B4J277 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV22A0A0B4J277 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV22A0A0B4J277 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRAV22A0A0B4J277 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV22A0A0B4J277 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV22A0A0B4J277 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV22A0A0B4J277 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV22A0A0B4J277 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV22A0A0B4J277 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV22A0A0B4J277 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV22A0A0B4J277 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV22A0A0B4J277 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV22A0A0B4J277 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms