Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SAA2-SAA4A0A096LPE2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SAA2-SAA4A0A096LPE2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
SAA2-SAA4A0A096LPE2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
SAA2-SAA4A0A096LPE2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SAA2-SAA4A0A096LPE2 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.94■□□□□ 0.94
SAA2-SAA4A0A096LPE2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.94■□□□□ 0.94
SAA2-SAA4A0A096LPE2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SAA2-SAA4A0A096LPE2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SAA2-SAA4A0A096LPE2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
SAA2-SAA4A0A096LPE2 AL162393.1-201ENST00000437852 946 ntBASIC20.93■□□□□ 0.94
SAA2-SAA4A0A096LPE2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SAA2-SAA4A0A096LPE2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.93■□□□□ 0.94
SAA2-SAA4A0A096LPE2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SAA2-SAA4A0A096LPE2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SAA2-SAA4A0A096LPE2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SAA2-SAA4A0A096LPE2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SAA2-SAA4A0A096LPE2 AC100797.4-201ENST00000631653 1827 ntBASIC20.92■□□□□ 0.94
SAA2-SAA4A0A096LPE2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SAA2-SAA4A0A096LPE2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.92■□□□□ 0.94
SAA2-SAA4A0A096LPE2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.91■□□□□ 0.94
SAA2-SAA4A0A096LPE2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SAA2-SAA4A0A096LPE2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SAA2-SAA4A0A096LPE2 AC087741.3-201ENST00000624270 1347 ntBASIC20.9■□□□□ 0.94
SAA2-SAA4A0A096LPE2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SAA2-SAA4A0A096LPE2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SAA2-SAA4A0A096LPE2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.9■□□□□ 0.94
SAA2-SAA4A0A096LPE2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SAA2-SAA4A0A096LPE2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.89■□□□□ 0.93
SAA2-SAA4A0A096LPE2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SAA2-SAA4A0A096LPE2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.89■□□□□ 0.93
SAA2-SAA4A0A096LPE2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SAA2-SAA4A0A096LPE2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SAA2-SAA4A0A096LPE2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SAA2-SAA4A0A096LPE2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SAA2-SAA4A0A096LPE2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SAA2-SAA4A0A096LPE2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.88■□□□□ 0.93
SAA2-SAA4A0A096LPE2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SAA2-SAA4A0A096LPE2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SAA2-SAA4A0A096LPE2 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SAA2-SAA4A0A096LPE2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SAA2-SAA4A0A096LPE2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SAA2-SAA4A0A096LPE2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SAA2-SAA4A0A096LPE2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SAA2-SAA4A0A096LPE2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.86■□□□□ 0.93
SAA2-SAA4A0A096LPE2 AC135983.2-203ENST00000454486 1613 ntBASIC20.86■□□□□ 0.93
SAA2-SAA4A0A096LPE2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
SAA2-SAA4A0A096LPE2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.86■□□□□ 0.93
SAA2-SAA4A0A096LPE2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SAA2-SAA4A0A096LPE2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SAA2-SAA4A0A096LPE2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.85■□□□□ 0.93
SAA2-SAA4A0A096LPE2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SAA2-SAA4A0A096LPE2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SAA2-SAA4A0A096LPE2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SAA2-SAA4A0A096LPE2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.84■□□□□ 0.93
SAA2-SAA4A0A096LPE2 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SAA2-SAA4A0A096LPE2 AC044849.2-201ENST00000606596 710 ntBASIC20.84■□□□□ 0.93
SAA2-SAA4A0A096LPE2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.84■□□□□ 0.93
SAA2-SAA4A0A096LPE2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SAA2-SAA4A0A096LPE2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.84■□□□□ 0.93
SAA2-SAA4A0A096LPE2 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.83■□□□□ 0.93
SAA2-SAA4A0A096LPE2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.83■□□□□ 0.93
SAA2-SAA4A0A096LPE2 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SAA2-SAA4A0A096LPE2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SAA2-SAA4A0A096LPE2 WHAMMP2-203ENST00000563942 1603 ntBASIC20.82■□□□□ 0.92
SAA2-SAA4A0A096LPE2 LINC00273-201ENST00000539813 1452 ntBASIC20.82■□□□□ 0.92
SAA2-SAA4A0A096LPE2 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SAA2-SAA4A0A096LPE2 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SAA2-SAA4A0A096LPE2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SAA2-SAA4A0A096LPE2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SAA2-SAA4A0A096LPE2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.82■□□□□ 0.92
SAA2-SAA4A0A096LPE2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.81■□□□□ 0.92
SAA2-SAA4A0A096LPE2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SAA2-SAA4A0A096LPE2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SAA2-SAA4A0A096LPE2 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SAA2-SAA4A0A096LPE2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SAA2-SAA4A0A096LPE2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.79■□□□□ 0.92
SAA2-SAA4A0A096LPE2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SAA2-SAA4A0A096LPE2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SAA2-SAA4A0A096LPE2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SAA2-SAA4A0A096LPE2 BX255925.1-201ENST00000566954 1854 ntBASIC20.78■□□□□ 0.92
SAA2-SAA4A0A096LPE2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SAA2-SAA4A0A096LPE2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SAA2-SAA4A0A096LPE2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.78■□□□□ 0.92
SAA2-SAA4A0A096LPE2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SAA2-SAA4A0A096LPE2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.77■□□□□ 0.91
SAA2-SAA4A0A096LPE2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SAA2-SAA4A0A096LPE2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SAA2-SAA4A0A096LPE2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SAA2-SAA4A0A096LPE2 AP002414.2-202ENST00000590929 1450 ntBASIC20.75■□□□□ 0.91
SAA2-SAA4A0A096LPE2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SAA2-SAA4A0A096LPE2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SAA2-SAA4A0A096LPE2 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SAA2-SAA4A0A096LPE2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SAA2-SAA4A0A096LPE2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SAA2-SAA4A0A096LPE2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
SAA2-SAA4A0A096LPE2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SAA2-SAA4A0A096LPE2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.74■□□□□ 0.91
SAA2-SAA4A0A096LPE2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.74■□□□□ 0.91
SAA2-SAA4A0A096LPE2 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms