Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
SAA2-SAA4A0A096LPE2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SAA2-SAA4A0A096LPE2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
SAA2-SAA4A0A096LPE2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
SAA2-SAA4A0A096LPE2 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SAA2-SAA4A0A096LPE2 NRG1-221ENST00000614767 762 ntTSL 5 BASIC20.94■□□□□ 0.94
SAA2-SAA4A0A096LPE2 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.94■□□□□ 0.94
SAA2-SAA4A0A096LPE2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SAA2-SAA4A0A096LPE2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SAA2-SAA4A0A096LPE2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
SAA2-SAA4A0A096LPE2 AL162393.1-201ENST00000437852 946 ntBASIC20.93■□□□□ 0.94
SAA2-SAA4A0A096LPE2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SAA2-SAA4A0A096LPE2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.93■□□□□ 0.94
SAA2-SAA4A0A096LPE2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SAA2-SAA4A0A096LPE2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SAA2-SAA4A0A096LPE2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SAA2-SAA4A0A096LPE2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SAA2-SAA4A0A096LPE2 AC100797.4-201ENST00000631653 1827 ntBASIC20.92■□□□□ 0.94
SAA2-SAA4A0A096LPE2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SAA2-SAA4A0A096LPE2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.92■□□□□ 0.94
SAA2-SAA4A0A096LPE2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.91■□□□□ 0.94
SAA2-SAA4A0A096LPE2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SAA2-SAA4A0A096LPE2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SAA2-SAA4A0A096LPE2 AC087741.3-201ENST00000624270 1347 ntBASIC20.9■□□□□ 0.94
SAA2-SAA4A0A096LPE2 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SAA2-SAA4A0A096LPE2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SAA2-SAA4A0A096LPE2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.9■□□□□ 0.94
SAA2-SAA4A0A096LPE2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SAA2-SAA4A0A096LPE2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC20.89■□□□□ 0.93
SAA2-SAA4A0A096LPE2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SAA2-SAA4A0A096LPE2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.89■□□□□ 0.93
SAA2-SAA4A0A096LPE2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SAA2-SAA4A0A096LPE2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SAA2-SAA4A0A096LPE2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SAA2-SAA4A0A096LPE2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SAA2-SAA4A0A096LPE2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SAA2-SAA4A0A096LPE2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.88■□□□□ 0.93
SAA2-SAA4A0A096LPE2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SAA2-SAA4A0A096LPE2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SAA2-SAA4A0A096LPE2 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SAA2-SAA4A0A096LPE2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SAA2-SAA4A0A096LPE2 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SAA2-SAA4A0A096LPE2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SAA2-SAA4A0A096LPE2 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SAA2-SAA4A0A096LPE2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.86■□□□□ 0.93
SAA2-SAA4A0A096LPE2 AC135983.2-203ENST00000454486 1613 ntBASIC20.86■□□□□ 0.93
SAA2-SAA4A0A096LPE2 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
SAA2-SAA4A0A096LPE2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.86■□□□□ 0.93
SAA2-SAA4A0A096LPE2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SAA2-SAA4A0A096LPE2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SAA2-SAA4A0A096LPE2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC20.85■□□□□ 0.93
SAA2-SAA4A0A096LPE2 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SAA2-SAA4A0A096LPE2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SAA2-SAA4A0A096LPE2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SAA2-SAA4A0A096LPE2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.84■□□□□ 0.93
SAA2-SAA4A0A096LPE2 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SAA2-SAA4A0A096LPE2 AC044849.2-201ENST00000606596 710 ntBASIC20.84■□□□□ 0.93
SAA2-SAA4A0A096LPE2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.84■□□□□ 0.93
SAA2-SAA4A0A096LPE2 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SAA2-SAA4A0A096LPE2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.84■□□□□ 0.93
SAA2-SAA4A0A096LPE2 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.83■□□□□ 0.93
SAA2-SAA4A0A096LPE2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.83■□□□□ 0.93
SAA2-SAA4A0A096LPE2 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SAA2-SAA4A0A096LPE2 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SAA2-SAA4A0A096LPE2 WHAMMP2-203ENST00000563942 1603 ntBASIC20.82■□□□□ 0.92
SAA2-SAA4A0A096LPE2 LINC00273-201ENST00000539813 1452 ntBASIC20.82■□□□□ 0.92
SAA2-SAA4A0A096LPE2 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SAA2-SAA4A0A096LPE2 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SAA2-SAA4A0A096LPE2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SAA2-SAA4A0A096LPE2 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SAA2-SAA4A0A096LPE2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.82■□□□□ 0.92
SAA2-SAA4A0A096LPE2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.81■□□□□ 0.92
SAA2-SAA4A0A096LPE2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SAA2-SAA4A0A096LPE2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
SAA2-SAA4A0A096LPE2 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SAA2-SAA4A0A096LPE2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SAA2-SAA4A0A096LPE2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.79■□□□□ 0.92
SAA2-SAA4A0A096LPE2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SAA2-SAA4A0A096LPE2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SAA2-SAA4A0A096LPE2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SAA2-SAA4A0A096LPE2 BX255925.1-201ENST00000566954 1854 ntBASIC20.78■□□□□ 0.92
SAA2-SAA4A0A096LPE2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SAA2-SAA4A0A096LPE2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SAA2-SAA4A0A096LPE2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.78■□□□□ 0.92
SAA2-SAA4A0A096LPE2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SAA2-SAA4A0A096LPE2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.77■□□□□ 0.91
SAA2-SAA4A0A096LPE2 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SAA2-SAA4A0A096LPE2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SAA2-SAA4A0A096LPE2 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SAA2-SAA4A0A096LPE2 AP002414.2-202ENST00000590929 1450 ntBASIC20.75■□□□□ 0.91
SAA2-SAA4A0A096LPE2 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SAA2-SAA4A0A096LPE2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SAA2-SAA4A0A096LPE2 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SAA2-SAA4A0A096LPE2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SAA2-SAA4A0A096LPE2 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SAA2-SAA4A0A096LPE2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
SAA2-SAA4A0A096LPE2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SAA2-SAA4A0A096LPE2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.74■□□□□ 0.91
SAA2-SAA4A0A096LPE2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.74■□□□□ 0.91
SAA2-SAA4A0A096LPE2 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms