Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 CX3CL1-202ENST00000563383 3313 ntTSL 5 BASIC8.32□□□□□ -1.083e-19■□□□□ 8.2
PRPF8Q6P2Q9 CX3CL1-201ENST00000006053 3321 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.13e-19■□□□□ 8.2
PRPF8Q6P2Q9 CAT-204ENST00000530343 752 ntTSL 25.91□□□□□ -1.463e-7■□□□□ 8.2
PRPF8Q6P2Q9 ELMOD2-205ENST00000507667 594 ntTSL 420.91■□□□□ 0.942e-6■□□□□ 8.2
PRPF8Q6P2Q9 SLC52A2-212ENST00000533662 1106 ntTSL 220.79■□□□□ 0.922e-6■□□□□ 8.2
PRPF8Q6P2Q9 ZFP1-206ENST00000566105 262 ntTSL 319.75■□□□□ 0.752e-6■□□□□ 8.2
PRPF8Q6P2Q9 ELMOD2-204ENST00000503541 1839 ntTSL 219.2■□□□□ 0.662e-6■□□□□ 8.2
PRPF8Q6P2Q9 ZFP1-205ENST00000564989 261 ntTSL 319.17■□□□□ 0.662e-6■□□□□ 8.2
PRPF8Q6P2Q9 SLC52A2-213ENST00000534725 935 ntTSL 218.27■□□□□ 0.522e-6■□□□□ 8.2
PRPF8Q6P2Q9 ZNF580-206ENST00000592881 1019 ntTSL 318.27■□□□□ 0.522e-6■□□□□ 8.2
PRPF8Q6P2Q9 PCSK4-211ENST00000591303 537 ntTSL 317.64■□□□□ 0.412e-6■□□□□ 8.2
PRPF8Q6P2Q9 ABCF2-203ENST00000441774 941 ntTSL 317.36■□□□□ 0.372e-6■□□□□ 8.2
PRPF8Q6P2Q9 GRAMD1A-214ENST00000603907 450 ntTSL 217.33■□□□□ 0.362e-8■□□□□ 8.2
PRPF8Q6P2Q9 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.362e-6■□□□□ 8.2
PRPF8Q6P2Q9 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.312e-6■□□□□ 8.2
PRPF8Q6P2Q9 HDGFL2-206ENST00000614903 239 ntTSL 516.76■□□□□ 0.272e-6■□□□□ 8.2
PRPF8Q6P2Q9 HDGFL2-209ENST00000619255 320 ntTSL 316.51■□□□□ 0.232e-6■□□□□ 8.2
PRPF8Q6P2Q9 ZYX-205ENST00000446634 926 ntTSL 516.4■□□□□ 0.222e-6■□□□□ 8.2
PRPF8Q6P2Q9 ZNF580-204ENST00000590190 335 ntTSL 316.31■□□□□ 0.22e-6■□□□□ 8.2
PRPF8Q6P2Q9 PXN-215ENST00000548912 655 ntTSL 516.23■□□□□ 0.192e-6■□□□□ 8.2
PRPF8Q6P2Q9 ZNF581-202ENST00000585995 591 ntTSL 316.15■□□□□ 0.182e-6■□□□□ 8.2
PRPF8Q6P2Q9 LARP4B-212ENST00000614908 1826 ntTSL 416.08■□□□□ 0.172e-6■□□□□ 8.2
PRPF8Q6P2Q9 PCSK4-207ENST00000588195 1806 ntTSL 216.04■□□□□ 0.162e-6■□□□□ 8.2
PRPF8Q6P2Q9 ZYX-204ENST00000436448 632 ntTSL 415.49■□□□□ 0.072e-6■□□□□ 8.2
PRPF8Q6P2Q9 BCS1L-209ENST00000430322 1036 ntTSL 515.39■□□□□ 0.052e-6■□□□□ 8.2
PRPF8Q6P2Q9 BCS1L-214ENST00000456050 815 ntTSL 515.39■□□□□ 0.052e-6■□□□□ 8.2
PRPF8Q6P2Q9 PCSK4-205ENST00000586616 2855 ntTSL 215.27■□□□□ 0.032e-6■□□□□ 8.2
PRPF8Q6P2Q9 H2AFY2-202ENST00000455786 908 ntTSL 515.08■□□□□ 02e-6■□□□□ 8.2
PRPF8Q6P2Q9 MFSD12-207ENST00000588626 525 ntTSL 315.03■□□□□ -02e-6■□□□□ 8.2
PRPF8Q6P2Q9 SLC52A2-207ENST00000526891 592 ntTSL 414.83□□□□□ -0.032e-6■□□□□ 8.2
PRPF8Q6P2Q9 PCSK4-203ENST00000586002 545 ntTSL 314.6□□□□□ -0.072e-6■□□□□ 8.2
PRPF8Q6P2Q9 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.49□□□□□ -0.092e-6■□□□□ 8.2
PRPF8Q6P2Q9 DIS3L2-206ENST00000417808 923 ntTSL 214.43□□□□□ -0.12e-6■□□□□ 8.2
PRPF8Q6P2Q9 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.132e-8■□□□□ 8.2
PRPF8Q6P2Q9 UBAC1-202ENST00000465873 882 ntTSL 214.05□□□□□ -0.162e-6■□□□□ 8.2
PRPF8Q6P2Q9 BCS1L-206ENST00000423377 583 ntTSL 313.93□□□□□ -0.182e-6■□□□□ 8.2
PRPF8Q6P2Q9 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.84□□□□□ -0.192e-6■□□□□ 8.2
PRPF8Q6P2Q9 PXN-205ENST00000440827 516 ntTSL 413.62□□□□□ -0.232e-6■□□□□ 8.2
PRPF8Q6P2Q9 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.232e-6■□□□□ 8.2
PRPF8Q6P2Q9 PXN-211ENST00000546532 729 ntTSL 513.59□□□□□ -0.232e-6■□□□□ 8.2
PRPF8Q6P2Q9 PXN-219ENST00000552550 588 ntTSL 213.24□□□□□ -0.292e-6■□□□□ 8.2
PRPF8Q6P2Q9 C9orf3-219ENST00000488186 1211 ntTSL 513.19□□□□□ -0.32e-6■□□□□ 8.2
PRPF8Q6P2Q9 ZYX-210ENST00000497119 560 ntTSL 213.12□□□□□ -0.312e-6■□□□□ 8.2
PRPF8Q6P2Q9 FAT1-208ENST00000509647 1852 ntTSL 1 (best)13.12□□□□□ -0.312e-6■□□□□ 8.2
PRPF8Q6P2Q9 VTI1A-203ENST00000472892 1247 ntTSL 1 (best)13.1□□□□□ -0.312e-6■□□□□ 8.2
PRPF8Q6P2Q9 SLC22A23-204ENST00000433689 730 ntTSL 212.82□□□□□ -0.364e-18■□□□□ 8.2
PRPF8Q6P2Q9 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC12.74□□□□□ -0.372e-6■□□□□ 8.2
PRPF8Q6P2Q9 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.432e-6■□□□□ 8.2
PRPF8Q6P2Q9 VTI1A-209ENST00000496445 853 ntTSL 212.34□□□□□ -0.432e-6■□□□□ 8.2
PRPF8Q6P2Q9 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.432e-6■□□□□ 8.2
PRPF8Q6P2Q9 PCSK4-202ENST00000441747 2641 ntTSL 212.2□□□□□ -0.462e-6■□□□□ 8.2
PRPF8Q6P2Q9 ANAPC16-203ENST00000478193 734 ntTSL 212.1□□□□□ -0.478e-11■□□□□ 8.2
PRPF8Q6P2Q9 VTI1A-206ENST00000489142 727 ntTSL 212□□□□□ -0.492e-6■□□□□ 8.2
PRPF8Q6P2Q9 PCSK4-210ENST00000591201 2358 ntTSL 511.96□□□□□ -0.492e-6■□□□□ 8.2
PRPF8Q6P2Q9 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC11.95□□□□□ -0.52e-8■□□□□ 8.2
PRPF8Q6P2Q9 CPT1B-206ENST00000423069 719 ntTSL 511.94□□□□□ -0.52e-8■□□□□ 8.2
PRPF8Q6P2Q9 NCOR1-225ENST00000584872 865 ntTSL 311.92□□□□□ -0.52e-8■□□□□ 8.2
PRPF8Q6P2Q9 LDAH-203ENST00000402479 493 ntTSL 311.92□□□□□ -0.52e-6■□□□□ 8.2
PRPF8Q6P2Q9 TADA3-206ENST00000492635 576 ntTSL 311.86□□□□□ -0.512e-6■□□□□ 8.2
PRPF8Q6P2Q9 BCS1L-208ENST00000428880 804 ntTSL 411.72□□□□□ -0.532e-6■□□□□ 8.2
PRPF8Q6P2Q9 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC11.49□□□□□ -0.572e-6■□□□□ 8.2
PRPF8Q6P2Q9 MARCH7-205ENST00000421037 559 ntTSL 411.48□□□□□ -0.572e-8■□□□□ 8.2
PRPF8Q6P2Q9 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.582e-8■□□□□ 8.2
PRPF8Q6P2Q9 EVPL-205ENST00000593037 545 ntTSL 311.34□□□□□ -0.592e-6■□□□□ 8.2
PRPF8Q6P2Q9 ZFP1-204ENST00000563356 560 ntTSL 411.01□□□□□ -0.652e-6■□□□□ 8.2
PRPF8Q6P2Q9 SGSM2-206ENST00000572925 644 ntTSL 310.75□□□□□ -0.692e-6■□□□□ 8.2
PRPF8Q6P2Q9 MARCH7-207ENST00000473749 821 ntTSL 310.68□□□□□ -0.72e-8■□□□□ 8.2
PRPF8Q6P2Q9 PXDC1-204ENST00000485986 532 ntTSL 210.47□□□□□ -0.732e-6■□□□□ 8.2
PRPF8Q6P2Q9 LARP4B-206ENST00000469487 859 ntTSL 210.4□□□□□ -0.742e-6■□□□□ 8.2
PRPF8Q6P2Q9 PIGF-203ENST00000412717 737 ntTSL 310.28□□□□□ -0.762e-8■□□□□ 8.2
PRPF8Q6P2Q9 USP31-202ENST00000563525 1560 ntTSL 510.24□□□□□ -0.772e-8■□□□□ 8.2
PRPF8Q6P2Q9 VTI1A-208ENST00000494728 463 ntTSL 210.23□□□□□ -0.772e-6■□□□□ 8.2
PRPF8Q6P2Q9 ELMOD2-206ENST00000511887 751 ntTSL 4 BASIC9.95□□□□□ -0.822e-6■□□□□ 8.2
PRPF8Q6P2Q9 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC9.94□□□□□ -0.822e-6■□□□□ 8.2
PRPF8Q6P2Q9 RNF220-211ENST00000474956 3303 ntTSL 29.8□□□□□ -0.842e-8■□□□□ 8.2
PRPF8Q6P2Q9 ARHGEF17-206ENST00000544519 579 ntTSL 49.77□□□□□ -0.852e-8■□□□□ 8.2
PRPF8Q6P2Q9 PXN-210ENST00000543331 957 ntTSL 49.71□□□□□ -0.852e-6■□□□□ 8.2
PRPF8Q6P2Q9 IGF1R-216ENST00000560972 310 ntTSL 1 (best)9.69□□□□□ -0.863e-13■□□□□ 8.2
PRPF8Q6P2Q9 LARP4B-209ENST00000608970 656 ntTSL 29.61□□□□□ -0.872e-6■□□□□ 8.2
PRPF8Q6P2Q9 LARP4B-204ENST00000440895 656 ntTSL 29.61□□□□□ -0.872e-6■□□□□ 8.2
PRPF8Q6P2Q9 ANAPC16-205ENST00000621663 3567 ntAPPRIS P1 TSL 3 BASIC9.5□□□□□ -0.898e-11■□□□□ 8.2
PRPF8Q6P2Q9 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.92e-8■□□□□ 8.2
PRPF8Q6P2Q9 CDK5RAP2-219ENST00000495406 635 ntTSL 29.42□□□□□ -0.92e-6■□□□□ 8.2
PRPF8Q6P2Q9 PTBP3-206ENST00000450374 368 ntTSL 59.21□□□□□ -0.942e-6■□□□□ 8.2
PRPF8Q6P2Q9 ZFP1-203ENST00000464850 3067 ntTSL 2 BASIC9.2□□□□□ -0.942e-6■□□□□ 8.2
PRPF8Q6P2Q9 PIGT-266ENST00000640649 536 ntTSL 29.11□□□□□ -0.952e-6■□□□□ 8.2
PRPF8Q6P2Q9 SGSM2-209ENST00000573851 571 ntTSL 28.78□□□□□ -12e-6■□□□□ 8.2
PRPF8Q6P2Q9 BCS1L-219ENST00000490188 647 ntTSL 38.71□□□□□ -1.022e-6■□□□□ 8.2
PRPF8Q6P2Q9 ABCF2-204ENST00000468073 1031 ntTSL 28.69□□□□□ -1.022e-6■□□□□ 8.2
PRPF8Q6P2Q9 VTI1A-204ENST00000480057 598 ntTSL 28.67□□□□□ -1.022e-6■□□□□ 8.2
PRPF8Q6P2Q9 TECR-218ENST00000599646 2899 nt8.4□□□□□ -1.063e-13■□□□□ 8.2
PRPF8Q6P2Q9 VTI1A-205ENST00000483122 2423 ntTSL 48.4□□□□□ -1.062e-6■□□□□ 8.2
PRPF8Q6P2Q9 ANAPC16-201ENST00000299381 3195 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.078e-11■□□□□ 8.2
PRPF8Q6P2Q9 LDAH-206ENST00000419825 826 ntTSL 3 BASIC8.34□□□□□ -1.082e-6■□□□□ 8.2
PRPF8Q6P2Q9 C9orf3-214ENST00000473778 2396 ntTSL 28.29□□□□□ -1.082e-6■□□□□ 8.2
PRPF8Q6P2Q9 PTBP3-208ENST00000487997 389 ntTSL 38.05□□□□□ -1.122e-6■□□□□ 8.2
PRPF8Q6P2Q9 ZFP1-202ENST00000393430 3250 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.142e-6■□□□□ 8.2
PRPF8Q6P2Q9 AC009053.1-203ENST00000565724 894 ntTSL 57.87□□□□□ -1.152e-6■□□□□ 8.2
PRPF8Q6P2Q9 PXN-218ENST00000551327 588 ntTSL 47.81□□□□□ -1.162e-6■□□□□ 8.2
PRPF8Q6P2Q9 ANAPC16-204ENST00000615507 3100 ntTSL 3 BASIC7.68□□□□□ -1.188e-11■□□□□ 8.2
Retrieved 100 of 73,762 protein–RNA pairs in 3110.4 ms